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EMAGE:31508

Pax7 paired box gene 7 ( MGI:97491)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508
euxassay_019450_02 euxassay_019450_03 euxassay_019450_04 euxassay_019450_05 euxassay_019450_06
EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508
euxassay_019450_07 euxassay_019450_08 euxassay_019450_09 euxassay_019450_10 euxassay_019450_11
EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508
euxassay_019450_12 euxassay_019450_13 euxassay_019450_14 euxassay_019450_15 euxassay_019450_16
EMAGE:31508 EMAGE:31508 EMAGE:31508 EMAGE:31508
euxassay_019450_17 euxassay_019450_18 euxassay_019450_19 euxassay_019450_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
vertebral axis musculature
moderate moderate
regionalmoderate expression: see section 02 03 05 06 07 13 14 15 17 18 19 weak expression: see section 04 08 09 10 11 12 16 20
tail mesenchyme
weak weak
regionalweak expression: see section 12 13 14 15 16 17
nasal cavity epithelium
moderate moderate
regionalmoderate expression: see section 08 09 14 15 16 weak expression: see section 10 11
midbrain mantle layer
strong strong
regionalstrong expression: see section 07 08 10 11 12 13 14 15 16 17 19 20 moderate expression: see section 09 18
diencephalon lateral wall mantle layer
strong strong
regionalstrong expression: see section 12 15 moderate expression: see section 10 11 14
lung
moderate moderate
regionalmoderate expression: see section 06 07 09 13 14 15 17 18 19 weak expression: see section 03 04 05 08 10 11 16 20
urethra of male
weak weak
regionalweak expression: see section 13 14
foot mesenchyme
moderate moderate
regionalmoderate expression: see section 05 weak expression: see section 04 06 20
nose
moderate moderate
regionalmoderate expression: see section 17 weak expression: see section 06 07 08 09 16 18
pons mantle layer
strong strong
regionalstrong expression: see section 10 11 12 13 14 15
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T55140
Entity Detected:Pax7, paired box gene 7 ( MGI:97491)
Sequence:sense strand is shown

>T55140
GGAGACAAGAAAGAAGAAGATGGCGAGAAGAAAGCCAAACACAGCATCGATGGCATCCTGGGCGACAAAG
GGAACCGTCTGGATGAGGGCTCAGATGTGGAATCAGAACCCGACCTCCCCCTGAAGCGCAAGCAGCGCCG
CAGTCGGACCACGTTCACAGCCGAGCAGCTGGAGGAGCTAGAGAAGGCCTTTGAGAGGACCCACTACCCG
GACATCTACACCCGGGAGGAGCTGGCACAGAGGACCAAGCTCACGGAGGCACGCGTCCAGGTCTGGTTCA
GTAACCGGCGTGCCCGCTGGCGCAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCC
GGGAGGTTTCCCACCCACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCGGACTCTACCTACCCCACC
ACCACCATCTCCCAAGATGGGGGCAGCACAGTACACAGGCCCCAGCCCCTTCCGCCATCAACCATGCATC
AGGGTGGGCTGGCTGCGGCCGCTGCAGCAGCAGACACCAGCTCTGCCTACGGAGCCCGCCACAGCTTCTC
CAGCTACTCTGACAGCTTCATGAACCCTGGGGCTCCCTCCAACCACATGAACCCTGTCAGCAATGGCCTG
TCTCCTCAGGTCATGAGCATCCTTAGCAACCCGAGTGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCA
TCTCCCCGCTGCATGGAGGCCTGGACTCGGCTTCCTCCATCTCAGCCAGCTGCAGCCAACGGGCCGACTC
CATCAAGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACTGCCCACCCACCTACAGCACCACTGGCTAC
AGTGTGGACCCTGTGGCTGGCTACCAGTACAGCCAGTATGGCCAAACTGCTGTTGATTACCTGGCCAAAA
ACGTGAGCCTGTCCACACAGCGCCGTATGAAGCTTGGGGAACACTCCGCTGTGCTGGGACTTCTTCCTGT
GGAAACGGGACAAGCCTACTAG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019450 same experiment
 EMAGE:31546 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS