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EMAGE:31528

Slco5a1 solute carrier organic anion transporter family, member 5A1 ( MGI:2443431)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
dorsal root ganglion
weak weak
regionalweak expression: see section 06 07 08 09 10 11 15 16 17
facial vii ganglion
weak weak
regionalweak expression: see section 04 05 20 21 22
neural retina
moderate moderate
regionalmoderate expression: see section 01 weak expression: see section 02 03
trigeminal v ganglion
weak weak
regionalweak expression: see section 03 04 05 06 07 08 09 18 19 20 21 22 23
vestibulocochlear viii ganglion
weak weak
regionalweak expression: see section 06 07 08 18 19
glossopharyngeal ix ganglion
weak weak
regionalweak expression: see section 06 07 18
pericardium
moderate moderate
spottedmoderate expression: see section 07 08 09 10 11 12 16 weak expression: see section 13 15
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56019
Entity Detected:Slco5a1, solute carrier organic anion transporter family, member 5A1 ( MGI:2443431)
Sequence:sense strand is shown

>T56019
ATTTGTGACCCCAAATGAGCACGTAGCATGTCACAGAATTGAACTTTGAAGCTTCTTAGGGAAGTTTAGG
ATTAAACAGTCTAACTAGCAGGTTTTGATTATCAAGGCAATCGTTGACCCATTAGTGCTGTTACCAAAGT
ATTTTGTGTGAATTATTAAACATTCTTTAAAATCCTATAGTTATTTTAAAGCATTCTTACTTTGTTAATA
TTTCCATGCCAGGCTTTATTCTTGACTGGCCTATAACTTATCTTTATTTGCTACTCAGGTCCGAAATTAC
ACAGAGTGTACCTGTGTCCAAAGCCGACAAGTGATCACCCCGCCCACAGTGGGGCAGCGCAGCCAGCTCC
GAGTGGTCATCGTCAAAACCTATCTCAATGAGAACGGCTATGCTGTGTCTGGGAAGTGCAAACGCACCTG
CAATACCCTCATTCCCTTCCTGGTCTTCCTTTTCATAGTTACCTTCATCACAGCATGTGCCCAACCATCA
GCCATTATAGTGACTCTCAGGTGAGAACAGCTCCAGGCAGTGCTTGAGAGAGCCTATTGCAGAGGGACAG
AAGTCAAACAAAGCAGGGGATAGGAAGGAAAAGCTGCTGGCAGGCACCCATACGTGCTCTTCTGGGCTTA
AGGGAGAAAAGCTTTTATATCAGGGAGAAAAGGATGGCTGAAATACTGTCTATTCTAGAATCTTTTTTCA
GCTGGGTGCTATTCTTATTATTTATCAAACTTTCTTTCTAGTGCTTTTAGTGTCCGAAGTCTTTGTGCTA
TGAAGTCAGACATCATGAGTTGAAAGCCCTGTTTATGGGGCTGGAGAGATGGCTCACCGTTCAGAGCATT
GAATGCTCCTCCAGAGGGGCTGGGTTTGATTTCCAGTACCCACACACATAATCTTCTGTAATTCCAGTTA
CATGTGACACCTTCTTGTCCCCATCACAGGCACCAGACATGCAAAAGGTG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019698 same experiment
 EMAGE:10168 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS