Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:31700

Pbef1 ( MGI:1929865)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700
euxassay_004817_01 euxassay_004817_02 euxassay_004817_03 euxassay_004817_04 euxassay_004817_05
EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700
euxassay_004817_06 euxassay_004817_07 euxassay_004817_08 euxassay_004817_09 euxassay_004817_10
EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700
euxassay_004817_11 euxassay_004817_12 euxassay_004817_13 euxassay_004817_14 euxassay_004817_15
EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700 EMAGE:31700
euxassay_004817_16 euxassay_004817_17 euxassay_004817_18 euxassay_004817_19 euxassay_004817_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
axial musculature
moderate moderate
regionalmoderate expression: see section 01 02 12 13
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6511
Entity Detected:Pbef1, ( MGI:1929865)
Sequence:sense strand is shown

>T6511
GCGCCGGGCAGCTCGTGGCGCGGCGTCTCCGCTCCGGCCCGAGATGAATGCTGCGGCAGAAGCCGAGTTC
AACATCCTGCTGGCCACCGACTCGTACAAGGTTACTCACTATAAACAATACCCACCCAACACAAGCAAAG
TTTATTCCTACTTTGAATGCCGTGAAAAGAAGACAGAAAACTCCAAAGTAAGGAAGGTGAAATACGAGGA
AACAGTATTTTATGGGTTGCAGTACATTCTTAATAAGTACTTAAAAGGTAAAGTAGTGACCAAAGAGAAA
ATCCAGGAGGCCAAAGAAGTGTACAGAGAACATTTCCAAGATGATGTCTTTAACGAAAGAGGATGGAACT
ACATCCTTGAGAAATACGATGGTCATCTCCCAATTGAAGTAAAGGCTGTTCCCGAGGGCTCTGTCATCCC
CAGAGGGAACGTGCTGTTCACAGTGGAAAACACAGACCCAGAGTGCTACTGGCTTACCAATTGGATTGAG
ACTATTCTTGTTCAGTCCTGGTATCCAATTACAGTGGCCACAAATTCCAGAGAACAGAAGAAAATACTGG
CCAAATATTTGTTAGAAACCTCTGGTAACTTAGATGGTCTGGAATACAAGTTACATGACTTTGGTTACAG
AGGAGTCTCTTCGCAAGAGACTGCTGGCATAGGGGCATCTGCTCATTTGGTTAACTTTAAAGGAACAGAT
ACTGTGGCGGGAATTGCTCTAATTAAAAAATACTATGGGACAAAAGATCCTGTTCCAGGCTATTCTGTTC
CAGCAGCAGAGCACAGTACCATAACGGCTTGGGGGAAAGACCATGAGAAAGATGCTTTTGAACACATAGT
AACACAGTTCTCATCAGTGCCTGTGTCTGTGGTCAGCGATAGCTATGACATTTATAATGCGTGTGAGAAA
ATATGGGGTGAAGACCTGAGACATCTGATAGTATCGAGAAGTACAGAGGCACCACTAATCATCAGACCTG
ACTCTGGAAATCCTCTTGACACTGTATTGAAGGTCTTAGATATTTTAGGCAAGAAGTTTCCTGTTACTGA
GAACTCAAAAGGCTACAAGTTGCTGCCACCTTATCTTAGAGTCATTCAAGGAGATGGCGTGGATATCAAT
ACTTTACAAGAGATTGTAGAGGGAATGAAACAAAAGAAGTGGAGTATCGAGAATGTCTCCTTCGGTTCTG
GTGGCGCTTTGCTACAGAAGTTAACCCGAGACCTCTTGAATTGCTCCTTCAAGTGCAGCTATGTTGTAAC
CAATGGCCTTGGGGTTAATGTGTTTAAGGACCCAGTTGCTGATCCCAACAAAAGGTCAAAAAAGGGCCGG
TTATCTTTACATAGGACACCAGCGGGGAACTTTGTTACACTTGAAGAAGGAAAAGGAGACCTTGAGGAAT
ATGGCCATGATCTTCTCCATACGGTTTTCAAGAATGGGAAGGTGACAAAAAGCTACTCATTTGATGAAGT
CAGAAAAAATGCACAGCTGAACATCGAGCAGGACGTGGCACCTCATTAGGCTTCATGTGGCCGGGTTGTT
ATGTGTGCAGTGTGTGTATACATACATGCACGTATGTGTGCGCCTGTGCGTATGTACTAACATGTTCATT
GTACAGATGTGTGGGTTCGTGTTTATGATACACTGCAGCCAGATTATTTGTTGGTTTATGGACATACTGC
CCTTTTTATTTTTCTCCCAGTGTTTAGATGATCTCAGATTAGAAAACACTTACAACCATGTACAAGATTA
ATGCTGAAGCAAGCTTTTCAGGGTCCTTTGCTAATAGATAGTAATCCAATCTGGTGTTGATCTTTTCACA
AATAACAAACCAAGAAACTTTTATATATAACTACAGATCACATAAAACAGATTTGCATAAAATTACCATG
CCTGCTTTATGTTTATATTTAACTTGTATTTTTGTACAAACGAGATTGTGTAAGATATATTTAAAGTTTC
AGTGATTTACCAGTCTGTTTCCAACTTTTCATGATTTTTATGAGCACAGACTTTCAAGAAAATACTTGAA
ATAAATTACATTGCCTTTTGTCCATTAATCAGCAAATAAAACATGGCCTTAACCAAGTTGTTTGTGGTGT
TGTACATTTGCAAATTATGTCAGGACAGACAGATACCCAACAGAGTTCCGAACATCACTGCCCTTGTAGA
GTATGCAGCAGTCATTCTCCGTGGAAGAGAAGAATGGTTCTTACGCGAATGTTTAGGCATTGTACAATTC
TGTGCCCTGGTCAGTGTATATGTACCAGTGATGCCAAATCCCAAAGGCCTGTTCTGCAATTTTATATGTC
GGATATTGCCTGTGGCTCTAATATGCACCTCAAGATTTTAAGAAGATAATGTTTTTAGAGAGAATTTCTG
CTTCCACTATAGAATATATACATAAATGTAAAATATTGAAAGTGGAAGTAGTGTATTTTAAAGTAATTAC
ACTTCTGAATTTATTTTTCATATTCTATAGTTGGTATGTCTTAAATGAATTGCTGGAGTGGGTAGTGAGT
GTACTTATTTTAAATGTTTTGATTCTGTTATATTTTCATTAAGTTTTTTAAAAATTAAATTGGATATTAA
ACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3590087 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3590087 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004817 same experiment
 EMAGE:31617 same embryo
 EMAGE:31702 same embryo
 EMAGE:31692 same embryo
 EMAGE:29645 same embryo
 EMAGE:31688 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS