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EMAGE:31887

Serpinb11 serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 ( MGI:1914207)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31887 EMAGE:31887 EMAGE:31887 EMAGE:31887 EMAGE:31887
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euxassay_002819_11 euxassay_002819_12 euxassay_002819_13 euxassay_002819_14 euxassay_002819_15
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euxassay_002819_21 euxassay_002819_22 euxassay_002819_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
esophagus
moderate moderate
regionalmoderate expression: see section 14
thymus primordium
weak weak
regionalweak expression: see section 13 14 15 16
nasal cavity olfactory epithelium
strong strong
regionalstrong expression: see section 09 10 11 12 13 15 16 17 18
rectum
moderate moderate
regionalmoderate expression: see section 14 15
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T3919
Entity Detected:Serpinb11, serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 ( MGI:1914207)
Sequence:sense strand is shown

>T3919
GAAAGCAACAAAGGCATTGTTTGGGATAAGAATGGATCCCATCACCACAGCGAGTACTGAATTTTGCCTT
GATGTGTTCAAAGAGCTGAGCAGTAACAATGTGGGAGAAAACATCTTCTTTTCTCCGCTGACTACGTTTT
ATGCTCTAAGCATGCTTCTCCTGGGTACCAGGGGAAAGAGTGCTGAGCAAATGGAAAAGGTGCTCCACTA
TGACAGCTTTTCAGGAGTCTTAAAAGCAAAGACGAAAAATTCTTCTGAGTGCAGCCAAGTTGGAATGATG
CATCCTGATTTCAGAGCCCTGATTTCCCACATTAACCAACAGAACTCCCTCAGCGTTGCTAACAGAATCT
ACGGGACGAGGTCAATATCATTCCACAAGCAATATGTAAGATGTTGTGAGAAACTGTACCAAGCCAAGCT
GCAAACTGTTGATTTTGAACTATCTACAGAAGAGACAAGGAAAAGTATTAACGCTTGGGTTAAAAATAAA
ACTAATGGAAAAATCACAAATTTATTTGCAAAGGGTACAATTGACCCATCCTCGGTCATGGTCCTAGTGA
GTGCCATATATTTCAAGGGACAATGGCAAAATAAATTCCAAAAAAGAGAGACAGTGAAAGCCCCCTTTCA
CATGGGTGTGGGTAAAAGTACAGTTGTGAATATGATGTATCAGACTGGAACATTTAAGCTGGCTATCATA
AAGGAGCCAGAGATGCAAGTCCTTGAGCTTCCCTATGCCAACAACAAACTAAGAATGATCATCCTGCTTC
CTGTAGGCACAGCCAGCGTGAGCCAGATAGAAAAACACCTGAATGTGAAGATGCTTCGAGAGTGGACTAA
CCCTTCTAACATGGTGGAAAGAGAAGTGGATGTTCACATCCCTAAATTCAGTCTTTCAGTAAAATACGAC
CTAAACACCCTATTGAAATCCCTAGGCATGAGGGACATCTTCAACGTAGCCAATGCTGATCTCTCTGGAA
TGTCACCGGACAAGGGCCTATATTTATCTAAGGTTGTTCACAAGTCATATGTGGATGTCAATGAAGAAGG
CACAGAGGCAGCTGCAGCCACTGGGGAGAGTATTTCTGTGAAGCGACTCCCTGTCACAGTTCAGTTCACA
GCCAATTGTCCTTTCCTGTTCTTTATCTGGGATGAGTCTGGCAATATTTTATTTGCTGGCAAGTTTGCTT
CTCCATAGACAGAGGGCATCGTGGAGGCCTCAGAGATAGCTAAGAAGTACAGGGGCGAAGGGGCTGAACC
TTTGCATCTCAACTTTTGGTCATCTGCAAAGCAGGTCTACTATCGCCTCAGACTTATCCTGTGAGTTAGT
GAGCCCAAGACTCTAGCAGCTGTGTTAGAAGATCCATTTATACCAGTGCTCTTCTGGATTTAATATCTTT
GAGACCTCATCTGAGTACAGAGTGGCATAATTGATTTAACAGAGAAGTTTATAAAAGGTTTGATATGTTT
GGTTTTTCTATGAGTGAGATTGTGAATGAGTGATCTAGGGTTTCTACTTTGGCTGGATTTCTAAATATAA
ATTTATTGCATGCCTATGGATTTCAGCTCAAACTTCTACATGGATCATAATATATAGACACAATGCTTTT
AACTCTTTGAAGATAAGAATAAACTATATCCGTTAATAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2646766 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2646766 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002819 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS