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EMAGE:31890

Ces1 ( MGI:88378)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
meckel's cartilage
moderate moderate
regionalmoderate expression: see section 03 09 10 11 12 13 14 15 16 17 18 19
tibia
moderate moderate
regionalmoderate expression: see section 01
femur
moderate moderate
regionalmoderate expression: see section 01 02 05 21
temporal bone petrous part
moderate moderate
regionalmoderate expression: see section 01 02 03 04 20 21 22 23
fibula
moderate moderate
regionalmoderate expression: see section 01
nasal septum
moderate moderate
regionalmoderate expression: see section 14 15
lung
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
nose
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 12 13 14 15 16 17 18 19 20
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T30073
Entity Detected:Ces1, ( MGI:88378)
Sequence:sense strand is shown

>T30073
ACTTGGACCAGGTGGCTGCACTACATTGGGTCCAAGACAACATTGCCAACTTTGGGGGCAACCCAGGATC
TGTGACTATCTTCGGCGAGTCAGCAGGAGGTGAAAGTGTCTCTGTTCTTGTGTTAAGCCCACTGGCCAAG
AACCTCTTCCACAGGGCCATCGCTCAGAGTAGTGTCATTTTCAATCCTTGCCTTTTTGGGAGAGCTGCCA
GACCCTTGGCTAAGAAAATTGCTGCTCTTGCTGGCTGTAAAACCACCACCTCCGCTGCCATGGTTCACTG
CCTGCGCCAGAAGACTGAAGATGAGCTCTTGGAGGTCTCACTGAAAATGAAATTTGGGACTGTTGATTTT
CTTGGAGACCCCAGAGAGAGCTATCCCTTCCTCCCTACTGTGATTGATGGAGTGTTGCTGCCAAAGGCAC
CAGAAGAGATTCTGGCTGAGAAGAGTTTCAACACTGTCCCCTACATGGTGGGCATCAACAAGCATGAGTT
TGGCTGGATCATTCCAATGTTTTTGGACTTCCCACTCTCTGAAAGAAAACTGGACCAGAAGACAGCTGCA
TCCATCCTGTGGCAGGCCTACCCAATTCTTAACATCTCTGAAAAGCTGATTCCAGCAGCTATTGAAAAGT
ATTTAGGAGGGACAGAAGACCCTGCCACAATGACAGACCTGTTCCTGGACTTGATTGGAGACATTATGTT
CGGTGTCCCATCTGTAATCGTGTCCCGTAGTCACAGAGATGCTGGAGCCCCAACCTACATGTATGAATAT
CAGTATCGCCCAAGTTTTGTATCAGACGATAGACCCCAGGAATTGTTAGGAGACCACGCTGATGAACTCT
TTTCTGTATGGGGAGCCCCGTTTTTAAAAGAGGGTGCTTCAGAAGAAGAGATCAACCTCAGCAAGATGGT
GATGAAATTCTGGGCCAACTTTGCT
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from the plasmid IMAGE:4163576), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 35242. Forward Primer - name:035242_F_IRAV20-23_D24_Ces1, sequence:ACTTGGACCAGGTGGCTG; Reverse Primer - name:035242_R_SP6_IRAV20-23_D24_Ces1, sequence:GAGCAAAGTTGGCCCAG. The reverse primer contains a 5' extension containing an SP6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using SP6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_011992 same experiment
 EMAGE:31209 same embryo
 EMAGE:31495 same embryo
 EMAGE:31494 same embryo
 EMAGE:31498 same embryo
 EMAGE:31497 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS