Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:31923

Lass4 LAG1 homolog, ceramide synthase 4 ( MGI:1914510)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923
euxassay_004762_01 euxassay_004762_02 euxassay_004762_03 euxassay_004762_04 euxassay_004762_05
EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923
euxassay_004762_06 euxassay_004762_07 euxassay_004762_08 euxassay_004762_09 euxassay_004762_10
EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923
euxassay_004762_11 euxassay_004762_12 euxassay_004762_13 euxassay_004762_14 euxassay_004762_15
EMAGE:31923 EMAGE:31923 EMAGE:31923 EMAGE:31923
euxassay_004762_16 euxassay_004762_17 euxassay_004762_18 euxassay_004762_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
oral epithelium
moderate moderate
regionalmoderate expression: see section 14 15 16 weak expression: see section 12 13 17
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 05 06 14 15 16
cervico-thoracic ganglion
weak weak
regionalweak expression: see section 06 08 10 11
spinal cord
moderate moderate
regionalmoderate expression: see section 06 07 08 09 10 11 12
brain
moderate moderate
regionalmoderate expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 weak expression: see section 01 02 03
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 05 06 15
trigeminal v nerve
moderate moderate
regionalmoderate expression: see section 07 14
thoracic ganglion
weak weak
regionalweak expression: see section 06
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 08 09 10 12 weak expression: see section 13
facial vii ganglion
moderate moderate
regionalmoderate expression: see section 03 04 05 15 16 17 18
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 02 03 04 05 06 07 14 15 16 17 18 19
nasal cavity respiratory epithelium
moderate moderate
regionalmoderate expression: see section 12 weak expression: see section 09
nasal cavity olfactory epithelium
moderate moderate
regionalmoderate expression: see section 12 weak expression: see section 08 09 13 14
cervical ganglion
moderate moderate
regionalmoderate expression: see section 14 weak expression: see section 06 13
naris
moderate moderate
regionalmoderate expression: see section 12
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6004
Entity Detected:Lass4, LAG1 homolog, ceramide synthase 4 ( MGI:1914510)
Sequence:sense strand is shown

>T6004
CTTGTCTAAGGCATCTTCGGATTAGCTGATCTCCGCACCGCCTCGGCCTGCATCTTGCTTTCTGAACCTC
CAGCATGTCGTTCAGCTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTTACCACCCAATGTCACATGG
GCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGCCCACCCTCACCACGTGCTTGCTGCCTTCCCAGTGG
CTCTGGTCCTGGTGGCTGTGCGAATTGTCTTTGAGAGATTTGTGGCCTTGCCCCTGAGCCGGTGGATGGG
TGTGCAGGATCCAATCAGGAGAAAGATAAAGCCCAACCCGGTGCTGGAGAAGTACTTCCTCAGGATGAAG
CAGTGTCCAGAGGAGACACAGATGGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAAC
GCTGGTTCAGGAGACGTCGGAACCAGGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGCCTGCTGGAG
GTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCG
CCATCATTGTGCTGGGAGAATTACCCACATCAGACCCTGAATTTGTCCCTGTACTGGTGGTACCTCCTGG
AGCTGGGCTTCTACCTTTCACTGCTGATCACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAAGGAGCA
GGTGGTGCACCATTTTGTGGCCGTGGGACTGATAGGCTTCTCCTACAGCGTCAACTTGCTCCGCATTGGC
GCTGTGGTACTGTTGTTGCATGACTGCTCCGACTACCTGCTGGAGGGTTGTAAGATTCTCAACTATGCCC
ACTTTAGGCGAGGGTGCGATGCTCTCTTCATCATGTTTGCCTTAGTCTTCTTCTACACGCGCCTCATATT
CTTCCCCACCCAGGTCATCTACACGTCTGTGTATGACTCCATCAAGAACTCGGGCCCCTTCTTTGGCTAC
TACTTCTTTATTGTGCTCTTGGTGATGCTACAGATTCTTCATGTGTACTGGTTCTGCCTCATCCTGCGCA
TGCTCTACAGTTTCCTGCATAAGGGTCAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTC
CAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGATGGCTCGAGGGTCTAGAGTAGCT
GTTACCAATGGCCCGCGGAGCCGGGCAGCAGCATGCCTGACCAATGGGCACACCCGGGCCACATAGACAA
CCTTGGACTGATGTTGAGGGGTTGCCGCCAGCATTGTGAATATTCAGATGCTGGGCTGGTGATTCTGGGA
GACAGGGAGGCCCTACCTCAAGGTAGGAAGAAGACTGATGATCTGTTTCCCTTCTGTTCCTCTCCCTTTA
TCCTTTTGAGCAGCTTGACAGAACCTGGGGGAGCAGTGGACTCTGCATCTGGCCTGAGCCAACCCCAGGC
TGTAGCTTGGGGGCTGTGGGGAGCTTTGGCTCCAAGGACCAATAAAACGTCAACAGCGATGAAAAAAAAA
AAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3487343 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3487343 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004762 same experiment
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS