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EMAGE:32066

Vangl2 vang-like 2 (van gogh, Drosophila) ( MGI:2135272)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
lower jaw molar
moderate moderate
regionalmoderate expression: see section 16
upper jaw molar
moderate moderate
regionalmoderate expression: see section 16
vibrissa
moderate moderate
regionalmoderate expression: see section 01 02 03 15 17 18 weak expression: see section 16
lower jaw incisor
moderate moderate
regionalmoderate expression: see section 07 10
upper jaw incisor
moderate moderate
regionalmoderate expression: see section 07 10 11
spinal cord
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 13 14 15 16
brain
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T30442
Entity Detected:Vangl2, vang-like 2 (van gogh, Drosophila) ( MGI:2135272)
Sequence:sense strand is shown

>T30442
ACGGGCACTTCTGAGCACAGTATCTCCCATGATGACCTCACGCGCATCGCCAAGGACATGGAGGACAGTG
TCCCGTTGGATTGTTCCCGCCACCTGGGCGTGGCGGCAGGGGCCATTCTGGCGCTGCTCTCGTTCCTCAC
CCCGCTGGCTTTCCTGCTGCTGCCTCCACTGCTGTGGCGGGAGGAGCTGGAGCCGTGTGGGACGGCCTGT
GAGGGCCTCTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCTGTTGGGCAGCTGGGCTCTGTTCTTCC
GCCGGCCCAAGGCCTCACTGCCCCGAGTCTTCGTGTTACGAGCTCTGCTCATGGTGCTTGTCTTCCTGCT
GGTTATTTCCTATTGGCTCTTCTACGGTGTGCGCATCTTGGACGCCCGGGAGCGGAGCTACCAGGGCGTG
GTTCAGTTTGCCGTTTCTCTAGTGGATGCTTTACTCTTCGTGCACTATCTGGCCGTAGTTCTGCTGGAGC
TCCGTCAGCTCCAGCCCCAGTTCACACTCAAGGTCGTGCGATCCACAGATGGGGCCAGCCGCTTCTACAA
TGTCGGCCATCTCAGCATCCAGCGAGTGGCAGTGTGGATCCTGGAGAAGTATTACCATGACTTCCCTGTC
TACAACCCCGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTTCAAGGTGTATT
CTCTCGGAGAGGAAAACAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACG
GAGGCGCGACAACAGCCACAATGAGTACTACTACGAGGAAGCCGAGCATGAGCGCAGAGTGCGCAAGCGC
AGGGCCAGGCTCGTGGTGGCTGTGGAGGAGGCCTTCACGCACATTAAGCGGCTGCAG
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from the plasmid IMAGE:6509008), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 58652. Forward Primer - name:058652_F_IRAV105_f01_Ltap, sequence:ACGGGCACTTCTGAGCAC; Reverse Primer - name:058652_R_SP6_IRAV105_f01_Ltap, sequence:CCTGCAGCCGCTTAATG. The reverse primer contains a 5' extension containing an SP6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using SP6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_012321 same experiment
 EMAGE:31449 same embryo
 EMAGE:29298 same embryo
 EMAGE:29287 same embryo
 EMAGE:30991 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS