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EMAGE:32197

Pigf ( MGI:99462)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
pancreas
moderate moderate
regionalmoderate expression: see section 09 10 11 12 13 16 17 18 19 weak expression: see section 14 15
stomach
weak weak
regionalweak expression: see section 02 03 04 05 06 07 08 09
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6757
Entity Detected:Pigf, ( MGI:99462)
Sequence:sense strand is shown

>T6757
GTCTGCGCCTGCGCCAGGGGCCATGCCAGCCTGTAGCACCTGAGGGTGGGAGGCGGTGGTGTCCCCCTTC
CCTTCGGCGGGCGGGAGAGTTAGATAGCTACCCAAGAAAACATCATGAAAGATACTGACATCAAGAGACT
TCTGTATACCAATCTTTTGTGCGTATTTTCAATTTTCCTAAGCATTTTCATTCCGTCCTTCTTCGTGGAC
AACTTCTCAGTATTGGAAGCTCATTTGACCTGGCTGTGTATCTGCTCTGCTTCTGTGACCACTGTCAATC
TCTTGTCGTACTTAGTAGTGAAACCGAATGTGTCCTCTAAAAGAAGTTCATTGTCACATAAGGTAACGCG
AGCTTTGAAATGCTGTGTCTTCTTCCTTATGTCTTGTTTTCTCCTTCACATCATTTTTGTTCTATATGGA
GCACCACTAATCGAGTTGGTGCTGGAAACGTTTTTATTTGCAGTTGTTTTGTCTACTTTTACTACAGTAC
CTTGTCTCTGTTTGTTAGGACCAAACCTCAAAGCATGGCTGAGAGTTTTCAGTAGAAATGGAGTTACATC
TATTTGGGAGAATAGTCTTCAGATCACTACAATTTCTAGTTTCACAGGAGCGTGGCTTGGAGCATTTCCT
ATTCCACTGGATTGGGAAAGACCGTGGCAGGTGTGGCCCATCTCCTGTACACTCGGAGCGACCTTTGGCT
ACGTGGCTGGCCTGGTTATCTCGCCACTCTGGATCTACTGGAATAGAAAGCAGCTTACATACAAGAACAA
TTAAGAGGAGAAAGGAGAGAAGTTATTTCTCTGTGCAGATTCCATAAGGGCTGTGCAGAAGTTACATGGT
CCAAGCCGGGCAGTCCATTTACAGCACTGTTGTTTTCTAAATGTCATTTCAACATGATGTGATTGTAGCT
TTTTAACTATGAAACCCCTGAGAGATTGTACCTTCTAGTTGAAATAAAGTATTTATAGTAGAAAAAAAAA
AAAAAA
Notes:The probe template was PCR amplified from IMAGE:3673399 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3673399 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006965 same experiment
 EMAGE:31939 same embryo
 EMAGE:31828 same embryo
 EMAGE:32217 same embryo
 EMAGE:31910 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS