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EMAGE:32248

Actr3b ( MGI:2661120)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248
euxassay_004135_01 euxassay_004135_02 euxassay_004135_03 euxassay_004135_04 euxassay_004135_05
EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248
euxassay_004135_06 euxassay_004135_07 euxassay_004135_08 euxassay_004135_09 euxassay_004135_10
EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248
euxassay_004135_11 euxassay_004135_12 euxassay_004135_13 euxassay_004135_14 euxassay_004135_15
EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248
euxassay_004135_16 euxassay_004135_17 euxassay_004135_18 euxassay_004135_19 euxassay_004135_20
EMAGE:32248 EMAGE:32248 EMAGE:32248 EMAGE:32248
euxassay_004135_21 euxassay_004135_22 euxassay_004135_23 euxassay_004135_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
olfactory lobe
moderate moderate
regionalmoderate expression: see section 05 06 10 17 weak expression: see section 04 11 12 13 15 16
telencephalon ventricular layer
moderate moderate
regionalmoderate expression: see section 02 03 04 05 06 07 08 09 10 17 18 19 20 21 22 23 24 weak expression: see section 11
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7820
Entity Detected:Actr3b, ( MGI:2661120)
Sequence:sense strand is shown

>T7820
GCACTGGGCACCCAGGGGCACGCTGGGGCTGGTGGGGACGGAGCGCCTCGTGGCCGAGCATGGCGGGCTC
GCTGCCTCCCTGCGTGGTTGACTGCGGCACCGGGTACACCAAGCTTGGCTACGCAGGCAACACTGAACCA
CAGTTCATTATCCCGTCATGTATCGCCATCCGAGAATCTGCAAAGGTAGTTGATCAAGCCCAAAGGAGGG
TGTTGAGAGGAGTCGATGACCTTGATTTCTTCATAGGGGATGAAGCCATTGATAAACCTACCTACGCTAC
CAAGTGGCCTATACGACATGGCATCGTTGAAGACTGGGATCTTATGGAAAGGTTCATGGAACAAGTGGTC
TTTAAGTATCTTCGTGCTGAACCTGAGGACCACTACTTTTTAATGACAGAACCTCCACTGAACACACCAG
AAAACAGAGAGTACCTTGCAGAAATCATGTTTGAATCATTTAATGTACCAGGACTCTACATTGCAGTACA
GGCAGTGCTGGCTCTGGCAGCCTCTTGGACATCCCGGCAAGTTGGTGAACGCACACTAACGGGGATAGTT
ATAGACAGTGGAGACGGTGTCACCCATGTTATCCCGGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCA
AACACATCCCAATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGG
AATCCCTCCTGAGCAGTCACTGGAAACCGCAAAAGCCATCAAGGAGAAGTACTGCTACATTTGCCCGGAT
ATTGTCAGAGAATTTGCTAAGTATGACGTAGATCCTCGGAAGTGGATCAAACAGTACACAGGGATCAATG
CCATCAACCAGAAGAAGTTCATTATAGATGTTGGTTATGAAAGGTTCCTGGGACCAGAAATATTCTTTCA
CCCTGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCGGATGTTGTCGATGAAGTCATACAGAGCTGT
CCCATAGATGTGCGCCGGCCGCTGTATAAGAACGTCGTTCTTTCTGGAGGCTCCACAATGTTCAGAGATT
TTGGACGTCGTCTGCAGAGAGATTTGAAAAGAGTGGTGGACGCCAGGTTAAAGCTGAGCCAAGAGCTCAG
TGGAGGCAGGATAAAGCCTAAACCTGTGGAGGTGCAGGTGGTCACGCACCACATGCAGCGCTATGCCGTG
TGGTTTGGAGGCTCGATGCTAGCCTCAACTCCGGAGTTCTTTCAGGTCTGTCACACCAAGAAGGACTATG
AGGAATACGGCCCAAGCATCTGCCGCCACAACCCTGTCTTCGGAGTCATGTCCTAGTGTCTGCGTTGGAG
CCATTGTCTGACAAGTGTCCTGTTGGGGAATAAGTGTCCTTCAGAACCCAGAGCAGCCACGGCTCCTGTA
CATAGCAGTGTGGAATGGGTGTGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCA
GTAAAGCCATTTATCCGGTACGACTGTTCGTGGTCCTCCTCCCGGCCCCTCCCCTCCTGCCCCTCCCACT
CTCTCTCCTTTCCACCCGAGATTCTAGTCAAGTGTAGCTCTGAAGGCGTCCATGCAACTGTAGAAACTAC
TAGAGGATGCAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTATTTTT
GTAAATAAAATGTTATAAACTTGAAATACAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6332588 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6332588 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004135 same experiment
 EMAGE:31590 same embryo
 EMAGE:31652 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS