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EMAGE:3236

Snai2 snail homolog 2 (Drosophila) ( MGI:1096393)
TS14 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3236
Fig3E of Sefton et al, 1998 [PMID:9671584] . Copyright: This image is from Sefton, et al., Development 125:3111-3121. (1998), and is displayed with the permission of The Company of Biologists Limited who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: flb - forelimb bud; lm - lateral mesoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:3236Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3236_wholemount_strong_3D_1.wlz
3236_wholemount_moderate_3D_1.wlz
3236_wholemount_weak_3D_1.wlz
3236_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3236_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trunk mesenchyme
detected detected
regionalmSlu expression was detected exclusively in the lateral mesoderm
trunk somite
detected detected
regionalmSlu was detected in sites corresponding to the rostral halves of the somites
embryo
detected detected
single cellTranscripts were observed in migrating neural crest cells but not in the premigratory neural crest
forelimb bud
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1328415
Entity Detected:Snai2, snail homolog 2 (Drosophila) ( MGI:1096393)
Sequence:sense strand is shown

>MGI:1328415
ATGCCGCGCTCCTTCCTGGTCAAGAAACATTTCAACGCCTCCAAGAAGCCCAACTACAGCGAACTGGACA
CACACACAGTTATTATTTCCCCATATCTCTATGAAAGTTACCCTATACCTGTCATACCAAAACCAGAGAT
CCTCACCTCGGGAGCATACAGCCCTATTACTGTATGGACATCGTCGGCAGCTCCACTCCACTCTCCTCTA
CCCAGTGGCCTTTCTCCTCTTACTGGATACTCCTCATCCTTGGGGCGTGTAAGTCCCCCGCCTTCCTCTG
ACACTTCATCCAAGGATCACAGTGGTTCAGAAAGTCCCATTAGTGACGAAGAGGAGAGACTGCAGCCCAA
GCTTTCAGACCCCCATGCCATCGAAGCTGAGAAGTTTCAGTGCAATTTATGCAATAAGACCTATTCTACG
TTCTCTGGGCTGGCCAAACACAAGCAGCTGCACTGTGATGCCCAGTCTAGGAAATCGTTCAGCTGCAAGT
ACTGTGACAAGGAATATGTGAGCCTGGGTGCCCTGAAGATGCACATTCGAACCCACACATTGCCTTGTGT
CTGCAAGATCTGTGGCAAGGCTTTCTCCAGACCCTGGCTGCTTCAAGGACACATTAGAACTCACACTGGG
GAAAAGCCTTTCTCTTGCCCTCACTGCAATAGGGCTTTTGCAGACAGATCAAACCTGAGGGCACATCTGC
AGACCCACTCTGATGTAAAGAAATACCAGTGCAAAAACTGCTCCAAAACCTTCTCCAGAATGTCGCTTCT
GCATAAACATGAGGAGTCTGGCTGCTGTGTGGCACAC
nt 1 - nt 807 of U97059.1
Notes:The Snai2 (slug/mSlu) probe used in this study by Sefton et al, 1998 [PMID:9671584] is described as "nucleotides 1-807 (complete coding sequence)". U97059 corresponds to the accompanying GenBank sequence submission.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:either: BALB/c or SJL
Age:9.5 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Sefton M; Sanchez S; Nieto MA, 1998 [PMID:9671584] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9671584] Sefton M, Sanchez S, Nieto MA 1998 Conserved and divergent roles for members of the Snail family of transcription factors in the chick and mouse embryo. Development (125):3111-21
Links:MGI:1328417 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI