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EMAGE:3318

Gbx2 gastrulation brain homeobox 2 ( MGI:95668)
TS12 (8.5 dpc)
in situ hybridisation

Data Images
EMAGE:3318
Figure 6G of Xue et al., 2001 [PMID:11290295] .Copyright: This image is from Xue et al., Development 128: 1559-1572 (2001), and is displayed with the permission of The Company of Biologists Limited who owns the Copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3318Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3318_wholemount_strong_3D_1.wlz
3318_wholemount_moderate_3D_1.wlz
3318_wholemount_possible_3D_1.wlz
3318_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3318_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
primitive streak
detected detected
regionalExpression is located distally through the primitive streak to the posterior end of the embryo.
future hindbrain
detected detected
regionalExpression in the anterior hindbrain.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:26910
Entity Detected:Gbx2, gastrulation brain homeobox 2 ( MGI:95668)
Sequence:sense strand is shown

>MGI:26910
GGCGCCCGCCAGAGACAAGTGCGCCGGCTTCGCGCGCTCCCCAGCCGCCCGTGGGAGACGACGGACTGCA
GGACGGACAGACGGACGGACGCACGCACTGCTGGTAGCTGGGCCGAGACCTGCAGACGCGAAGCGCGCGC
GTTCCGACGGGCTAGCAGCCGGGAGCGGTTCCGGCGAACGCGAGGTCCCCGGCGCCCTCTCCATCCCGGG
CGCACGGCCTCATCGCGCTCGGTGGCTGCACCCGTGCAGGCCGGGTATGCTGCGGGTCCTGCACTGAGGG
GCGGTGGTGGTGTCTGTGCTCTGGGCACCGCTCAGCCCCTGCCCGGAGTTCCCGGTGGTACTCCCAGCGT
CCGGAGGGCTTCCAGGCGGCGGCGGGACACGGGGACTTTTCGTCTCTCCCTGGCTTCTCCCGAACGCGTC
TATGAGCGCAGCGTTCCCGCCGTCGCTGATGATGATGCAGCGCCCGCTGGGGAGTAGTACCGCCTTCAGC
ATAGACTCGCTGATCGGCAGCCCGCCGCAGCCCAGTCCCGGCCATTTCGTCTACACCGGCTACCCCATGT
TCATGCCCTACCGGCCGGTGGTGCTGCCGCCACCGCCGCCACCGCCTCCCGCGCTGCCCCAGGCAGCGCT
GCAGCCCGCTCTGCCGCCCGCGCACCCTCACCACCAGATCCCCAGCCTGCCCACCGGCTTCTGCTCCAGC
CTGGCGCAGGGCATGGCGCTCACCTCCACGCTCATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCC
AGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAA
AGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCT
TTCTCTGCGGCCGAAGCGGTGCAGGCGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAA
AGGTGGAAGATGACCCGAAGGGCAAGGAGGAGAGCTTCTCTCTGGAGAGCGATGTGGATTACAGCTCAGA
TGACAATTTGCCTGGTCAGACTGCTCATAAGGAAGAAGACCCCGGCCACGCACTGGAGGAGACCCCGCAG
AGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGGCGGCGGACTGCCTTCACCAGCG
AACAGCTGCTGGAGCTGGAGAAAGAATTCCACTGCAAAAAGTACCTCTCCCTGACCGAGCGCTCACAGAT
CGCCCACGCCCTCAAACTCAGCGAGGTGCAAGTAAAAATCTGGTTCCAGAACCGCCGGGCCAAGTGGAAA
CGTGTCAAGGCAGGCAACGCCAATTCCAAGACGGGGGAGCCCTCTCGGAACCCCAAGATTGTCGTCCCCA
TCCCTGTTCACGTTAGCAGGTTCGCTATTCGAAGTCAACACCAGCAGCTGGAGCAGGCCCGACCCTGAGG
GCCCAGCCAGGGTGGACACCACCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGT
TTAAAGCAGAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAGAGTATATTCATTAGACG
GGCTTAAAGGGGGCTACAGCCACACCAGAAGATACACTAAATATTTATTATACAACCCTACTTTGTACAT
AGATCTCTATCTAGACTGGATCTCAGCTGCAGTGTTTTGAAAGGGATAGGATCAAATCTCTCTCCTTACA
CTTTCCAGATGAAACAAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCCCAA
AGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCTTATTGTTATTTTTTGTTTGTTTGTT
TCTATTTTGGCTTTTTGAGTTGAGTGCAGAGCAGTCGGTTGATTTTGGAGCAATCTAGAACTCTGCTCTG
CTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTATCTGAGCCATGTCGGAAGCACGTCT
CCGTTGTGTTTAATTTATTTCAATGTAGCTTATTTTCATATAAGTTATGACATTTAAACAATCTCAGTCT
TGTGAATAATAAAAAAAAAGGCGAGG
nt 1 - nt 2126 of Z48800.1
Notes:The probe used in this study by Xue et al., 2001 [PMID:11290295] is indicated as that described by Bouillet et al., 1995 [PMID:8601031] i.e. a "2.1 kb Stra7/Gbx-2 cDNA". Editor's note: The 2.1kb sequence is depicted in Fig 1 therein and was submitted to GenBank by P. Bouillet (and subsequently assigned the ID Z48800).
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:8.5 dpc
Theiler Stage:TS12
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Xue Y; Wang X; Li Z; Gotoh N; Chapman D; Skolnik EY, 2001 [PMID:11290295] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11290295] Xue Y, Wang X, Li Z, Gotoh N, Chapman D, Skolnik EY 2001 Mesodermal patterning defect in mice lacking the Ste20 NCK interacting kinase (NIK). Development (128):1559-72
 [ doi:10.1002/aja.1002040404] [ PMID:8601031] Bouillet P, Chazaud C, Oulad-Abdelghani M, Dolle P, Chambon P 1995 Sequence and expression pattern of the Stra7 (Gbx-2) homeobox-containing gene induced by retinoic acid in P19 embryonal carcinoma cells. Dev Dyn (204):372-82
Links:MGI:1933100 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI