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EMAGE:3465

Gbx1 gastrulation brain homeobox 1 ( MGI:95667)
TS11 (7.5 dpc)
in situ hybridisation

Data Images
EMAGE:3465 EMAGE:3465
Fig2A.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00041-3] Gene Expr Patterns 3: 313-7, Waters ST; Wilson CP; Lewandoski M, Cloning and embryonic expression analysis of the mouse Gbx1 gene. Copyright 2003 Fig2F.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00041-3] Gene Expr Patterns 3: 313-7, Waters ST; Wilson CP; Lewandoski M, Cloning and embryonic expression analysis of the mouse Gbx1 gene. Copyright 2003

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: Image F is a section taken from the wholemount shown in Image A at the level of the white broken line. ps - primitive streak; en - endoderm; m - mesoderm; ec - ectoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:3465EMAGE:3465EMAGE:3465Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mappingwholemount mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3465_wholemount_strong_3D_2.wlz
3465_wholemount_moderate_3D_2.wlz
3465_wholemount_weak_3D_1.wlz
3465_wholemount_notDetected_3D_2.wlz
3465_voxel_strong_3D_1.wlz
3465_voxel_moderate_3D_1.wlz
3465_voxel_possible_3D_1.wlz
3465_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3465_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
primitive streak
detected detected
embryo ectoderm
detected detected
gradedThe highest expression is posterior.
embryo mesoderm
detected detected
gradedThe highest expression is posterior.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2669657
Entity Detected:Gbx1, gastrulation brain homeobox 1 ( MGI:95667)
Notes:The Gbx1 probe used in this study by Waters et al., 2003 [PMID:12799077] is described as "a 587 bp cDNA fragment consisting of homeobox and 3' UTR sequence was amplified from genomic DNA using PCR and cloned in the pBluescript KS(+/-) vector." Editors note: Insufficient information to define the probe end points.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:7.5 dpc
Theiler Stage:TS11
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Waters ST; Wilson CP; Lewandoski M, 2003 [PMID:12799077] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00041-3] [ PMID:12799077] Waters ST, Wilson CP, Lewandoski M 2003 Cloning and embryonic expression analysis of the mouse Gbx1 gene. Gene Expr Patterns (3):313-7
Links:MGI:2671701 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI