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EMAGE:3466

Gbx1 gastrulation brain homeobox 1 ( MGI:95667)
TS12 (5-10 Somite no.)
in situ hybridisation

Data Images
EMAGE:3466
Fig2G.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00041-3] Gene Expr Patterns 3: 313-7, Waters ST; Wilson CP; Lewandoski M, Cloning and embryonic expression analysis of the mouse Gbx1 gene. Copyright 2003

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: al - allantois; h - heart.
Expression Pattern Description
Spatial Annotation:
EMAGE:3466Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3466_wholemount_strong_3D_1.wlz
3466_wholemount_moderate_3D_1.wlz
3466_wholemount_weak_3D_1.wlz
3466_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3466_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future hindbrain
strong strong
The author describes expression in rhombomere 04 and the hindbrain posterior to rhombomere 05, and strong expression in rhombomere 03 and 05.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2669657
Entity Detected:Gbx1, gastrulation brain homeobox 1 ( MGI:95667)
Notes:The Gbx1 probe used in this study by Waters et al., 2003 [PMID:12799077] is described as "a 587 bp cDNA fragment consisting of homeobox and 3' UTR sequence was amplified from genomic DNA using PCR and cloned in the pBluescript KS(+/-) vector." Editors note: Insufficient information to define the probe end points.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:5-10 Somite no.
Theiler Stage:TS12
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Waters ST; Wilson CP; Lewandoski M, 2003 [PMID:12799077] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00041-3] [ PMID:12799077] Waters ST, Wilson CP, Lewandoski M 2003 Cloning and embryonic expression analysis of the mouse Gbx1 gene. Gene Expr Patterns (3):313-7
Links:MGI:2671701 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI