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EMAGE:3468

Gbx1 gastrulation brain homeobox 1 ( MGI:95667)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3468 EMAGE:3468
Fig4A.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00041-3] Gene Expr Patterns 3: 313-7, Waters ST; Wilson CP; Lewandoski M, Cloning and embryonic expression analysis of the mouse Gbx1 gene. Copyright 2003 Fig4F.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00041-3] Gene Expr Patterns 3: 313-7, Waters ST; Wilson CP; Lewandoski M, Cloning and embryonic expression analysis of the mouse Gbx1 gene. Copyright 2003

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: ba - branchial arch; fl - forelimb bud; g - genital region; hl - hindlimb bud; lv - lateral venrticle; mge - medial ganglionic eminence. Image F is a section taken from the wholemount shown in Image A in the region of the white line.
Expression Pattern Description
Spatial Annotation:
EMAGE:3468Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3468_wholemount_strong_3D_1.wlz
3468_wholemount_moderate_3D_1.wlz
3468_wholemount_possible_3D_1.wlz
3468_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3468_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
diencephalon
detected detected
regionalExpression is ventral.
telencephalon
detected detected
regionalExpression is in the medial ganglionic eminence (MGE).
branchial arch
not detected not detected
homogeneous
limb
not detected not detected
homogeneous
tail
not detected not detected
homogeneous
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2669657
Entity Detected:Gbx1, gastrulation brain homeobox 1 ( MGI:95667)
Notes:The Gbx1 probe used in this study by Waters et al., 2003 [PMID:12799077] is described as "a 587 bp cDNA fragment consisting of homeobox and 3' UTR sequence was amplified from genomic DNA using PCR and cloned in the pBluescript KS(+/-) vector." Editors note: Insufficient information to define the probe end points.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Waters ST; Wilson CP; Lewandoski M, 2003 [PMID:12799077] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00041-3] [ PMID:12799077] Waters ST, Wilson CP, Lewandoski M 2003 Cloning and embryonic expression analysis of the mouse Gbx1 gene. Gene Expr Patterns (3):313-7
Links:MGI:2671701 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI