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EMAGE:3602

Efna1 ephrin A1 ( MGI:103236)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3602
Fig2C.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(98)00142-7] Mech Dev 77: 201-4, McBride JL; Ruiz JC, Ephrin-A1 is expressed at sites of vascular development in the mouse. Copyright 1998

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations: lb, limb bud; s, somite; v, ventricle. Arrowheads = expression in branchial arch arteries. Bar = 100 microns.
Expression Pattern Description
Spatial Annotation:
EMAGE:3602Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3602_wholemount_strong_3D_1.wlz
3602_wholemount_moderate_3D_1.wlz
3602_wholemount_weak_3D_1.wlz
3602_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3602_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
1st arch artery
detected detected
2nd arch artery
detected detected
3rd arch artery
detected detected
cardiovascular system
detected detected
regionalExpression is in the intersomitic vessels.
forelimb bud
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2445336
Entity Detected:Efna1, ephrin A1 ( MGI:103236)
Notes:The template clone used to make the Efna1 probe used in this study by McBride & Ruiz, 1998 [PMID:9831653] is described as a "1.3 kb mouse B61 cDNA clone" that was obtained from Dr. R. Lindberg (AMGEN, Inc.). Editors Note: the actual start and end points of the probe sequence are not reported.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:McBride JL; Ruiz JC (1998) [PMID:9831653] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(98)00142-7] [ PMID:9831653] McBride JL, Ruiz JC 1998 Ephrin-A1 is expressed at sites of vascular development in the mouse. Mech Dev (77):201-4
Links:MGI:2446521 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI