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EMAGE:3619

Neurod1 neurogenic differentiation 1 ( MGI:1339708)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3619
Figure 3J. Copyright: This image is from Raft S, Development 2004;131():1801-1812 and is displayed with the permission of The Company of Biologists Limited who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Arrowhead denotes the position of a Bmp4 anterior stripe.
Expression Pattern Description
Spatial Annotation:
EMAGE:3619Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3619_wholemount_strong_3D_1.wlz
3619_wholemount_moderate_3D_1.wlz
3619_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3619_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
otocyst
detected detected
regionalExpression in epithelium. A border of expression is seen at the AP midline and the posterolateral region shows no expression. The expression is complementary to that of Tbx1.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1202579
Entity Detected:Neurod1, neurogenic differentiation 1 ( MGI:1339708)
Notes:The Neurod1 probe used in this study by Raft et al., 2004 [PMID:15084464] is indicated as that originally described by Lee et al., 1995 [PMID:7754368] as "a murine...neuroD [Neurod1] RNA probe (1.7 kb)". Editors Note: The region covered by this probe is unspecified.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:involves: 129/Sv * C57BL/6J * FVB * SJL
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Raft S; Nowotschin S; Liao J; Morrow BE, 2004 [PMID:15084464] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1242/dev.01067] [ PMID:15084464] Raft S, Nowotschin S, Liao J, Morrow BE 2004 Suppression of neural fate and control of inner ear morphogenesis by Tbx1. Development (131):1801-12
 [ doi:10.1126/science.7754368] [ PMID:7754368] Lee JE, Hollenberg SM, Snider L, Turner DL, Lipnick N, Weintraub H 1995 Conversion of Xenopus ectoderm into neurons by NeuroD, a basic helix-loop-helix protein. Science (268):836-44
Links:MGI:3044708 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI