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EMAGE:3644

Foxg1 forkhead box G1 ( MGI:1347464)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3644
Figure 5I. Copyright: This image is from Acampora D, Development 2001;128():4801-4813, and is displayed with the permission of The Company of Biologists Limited who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3644EMAGE:3644Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3644_voxel_strong_3D_1.wlz
3644_voxel_moderate_3D_1.wlz
3644_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3644_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
regionalThe details of these results are not described in the text.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2149762
Entity Detected:Foxg1, forkhead box G1 ( MGI:1347464)
Sequence:sense strand is shown

>MGI:2149762
GCCAAGCTGGCCTTTAAGCGCGGGGCGCGCCTCACCTCCACCGGCCTCACCTTCATGGACCGCGCCGGCT
CCCTCTACTGGCCCATGTCGCCCTTCCTGTCCCTGCACCACCCCCGCGCCAGCAGCACTTTGAGTTACAA
CGGGACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCGTGTTGACTCAAAACTCGCTGGGC
AACAACCACTCCTTCTCCACCGCCAACGGGCTGAGTGTGGACCGGCTGGTCAACGGGGAGATCCCGTACG
CCACGCACCACCTCACGGCCGCTGCGCTCGCCGCCTCGGTGCCCTGCGGCCTGTCGGTGCCCTGCTCCGG
GACCTACTCCCTCAACCCCTGCTCCGTCAACCTGCTCGCGGGCCAGACCAGTTACTTTTTCCCCCACGTC
CCGCACCCGTCAATGACTTCGCAGACCAGCACGTCCATGAGCGCCCGGGCCGCGTCCTCCTCTACGTCGC
CGCAGGCCCCCTCGACCCTGCCCTGTGAGTCTTTAAGACCCTCTTTGCCAAGTTTTACGACAGGACTGTC
CGGGGGACTGTCTGATTATTTCACACATCAAAATCAGGGGTCTTCTTCCAACCCTTTAATACATTAACAT
CCGGGGGACCAGACTGTAAGTGAACGTTTTACACACATTTGCATTGTAAATGATAATTAAAAAAATAAGT
CCAGGGATTTTTTATTAAGCCCCCCCTCCCCATTTCTGTACGTTTGTTCAGTCTTTAGGGTCGTTTACTA
TTCTAACACGGTGTGGAGTGTCAGCGAGGTGCAATGTGGGAGAATACATTGTA
nt 1385 - nt 2207 of NM_008241.1
Notes:The Foxg1 (BF-1) probe used in this study by Acampora et al., 2001 [PMID:11731460] is indicated as that originally described by Acampora et al., 1998 [PMID:9811592] i.e. a "PCR fragment including the region between aa 273 and aa 481 plus 198 bp downstream the TGA". Editors note: The probe start/end co-ordinates with respect to the Foxg1 cDNA RefSeq NM_008241.1 was determined from this information.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Strain:(C57BL/6 x DBA/2)F1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Acampora D; Boyl PP; Signore M; Martinez-Barbera JP; Ilengo C; Puelles E; Annino A; Reichert H; Corte G; Simeone A, 2001 [PMID:11731460] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11731460] Acampora D, Boyl PP, Signore M, Martinez-Barbera JP, Ilengo C, Puelles E, Annino A, Reichert H, Corte G, Simeone A 2001 OTD/OTX2 functional equivalence depends on 5' and 3' UTR-mediated control of Otx2 mRNA for nucleo-cytoplasmic export and epiblast-restricted translation. Development (128):4801-13
 [ PMID:9811592] Acampora D, Avantaggiato V, Tuorto F, Briata P, Corte G, Simeone A 1998 Visceral endoderm-restricted translation of Otx1 mediates recovery of Otx2 requirements for specification of anterior neural plate and normal gastrulation. Development (125):5091-104
Links:MGI:2155382 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI