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EMAGE:3652

Foxc1 forkhead box C1 ( MGI:1347466)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3652 EMAGE:3652
Fig5H (left hand embryo). Copyright: This image is from Sasaki H, Development 1993 May;118(1):47-59, and is displayed with the permission of The Company of Biologists Limited who owns the Copyright. Fig5H (right hand (control) embryo). Copyright: This image is from Sasaki H, Development 1993 May;118(1):47-59, and is displayed with the permission of The Company of Biologists Limited who owns the Copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
The second image shows a control embryo (sense probe used). Image annotations: ov - otic vesicle.
Expression Pattern Description
Spatial Annotation:
EMAGE:3652Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3652_wholemount_strong_3D_1.wlz
3652_wholemount_moderate_3D_1.wlz
3652_wholemount_weak_3D_1.wlz
3652_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3652_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
gradedExpression decreases from anterior to posterior
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:19192
Entity Detected:Foxc1, forkhead box C1 ( MGI:1347466)
Notes:The Foxc1 (MF-1) probe used in this study by Sasaki & Hogan, 1993 [PMID:8375339] was transcribed from the entire insert of clone c52, which is 1kB in length. Editors note: the region of the cDNA or actual sequence of this 1kb clone is not reported in this publication.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:(ICR x Swiss Webster)F1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Sasaki H & Hogan BL, 1993 [PMID:8375339] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:8375339] Sasaki H, Hogan BL 1993 Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo. Development (118):47-59
Links:MGI:1339085 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI