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EMAGE:3700

Tbr1 T-box brain gene 1 ( MGI:107404)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3700
Figure 3E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(98)00243-3] Mech Dev 81: 199-203, Ciruna BG; Rossant J, Expression of the T-box gene Eomesodermin during early mouse development. Copyright 1999.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3700Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3700_wholemount_strong_3D_1.wlz
3700_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3700_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
telencephalon
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:200243
Entity Detected:Tbr1, T-box brain gene 1 ( MGI:107404)
Sequence:sense strand is shown

>MGI:200243
GTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCG
TTACCTACTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACCGTCCCAGTGCCATGTTCCCGTACCCCA
GCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAGCCCCAGTCGCTACATGGCCCACCACCCGGT
CATTACCAACGGAGCTTACAACAGCCTGCTGTCCAACTCTTCGCCGCAGGCTACCCCACGGCCGGCTACC
CCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCCCCTTTCTACCAGTTCTCCTCCACCCAGCCCGG
GTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAACAGGCCACTTTGGCTGAAATTTCATCGGCATCAA
ACGGAGATGATCATCACTAAACAGGGAAGGCGCATGTNTTCCTTTTTGAGTTTTAACATTTCTGGTCTCG
ATCCCACG
Notes:The Tbr1 probe used in this study by Ciruna & Rossant, 1999 [PMID:10330500] "consisted of an amino-terminal 1.3kb Tbr-1 EST obtained from Soares mouse p3NMF19.5 cDNA library (W09676)". Editor Note: This clone is IMAGE:303483.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Ciruna BG & Rossant J, 1999 [PMID:10330500] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(98)00243-3] [ PMID:10330500] Ciruna BG, Rossant J 1999 Expression of the T-box gene Eomesodermin during early mouse development. Mech Dev (81):199-203
Links:MGI:2450677 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI