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EMAGE:3757

Arx aristaless related homeobox ( MGI:1097716)
TS18 (11 dpc)
in situ hybridisation

Data Images
EMAGE:3757 EMAGE:3757 EMAGE:3757
Figure 6A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00062-2] Mech Dev 65: 99-109, Miura H; Yanazawa M; Kato K; Kitamura K, Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Copyright 1997. Figure 6C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00062-2] Mech Dev 65: 99-109, Miura H; Yanazawa M; Kato K; Kitamura K, Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Copyright 1997. Figure 6E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00062-2] Mech Dev 65: 99-109, Miura H; Yanazawa M; Kato K; Kitamura K, Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Copyright 1997.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Note: Coronal views at E11 dpc. A more rostral than C. c, presumptive cerebral cortex; cci, cingulate cortex; dt, dorsal thalamus; It, lamina terminalis; g, ganglionic eminence; h, hippocampus; hy, hypothalamus; sa, septal area; vt, ventral thalamus. Bar: 200 microns.
Expression Pattern Description
Spatial Annotation:
EMAGE:3757EMAGE:3757EMAGE:3757EMAGE:3757Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D mapping3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3757_voxel_moderate_3D_1.wlz
3757_voxel_strong_3D_1.wlz
3757_voxel_moderate_3D_2.wlz
3757_voxel_notDetected_3D_1.wlz
3757_voxel_strong_3D_2.wlz
3757_voxel_moderate_3D_3.wlz
3757_voxel_notDetected_3D_2.wlz
3757_voxel_strong_3D_3.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3757_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
telencephalon
detected detected
regionalExpression is in the ventriclular zone of the dorsal telencephalon, intense in the intermediate and mantle zone, weak in the vernticular zone of the medial and presumptive lateral ganglionic eminences and absent in the cingulate cortex or septal area.
diencephalon lamina terminalis
detected detected
diencephalon
detected detected
regionalExpression are weak in the ventricular zone, but intense in the intermediate and mantle zones of the ventral thalamus.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3037500
Entity Detected:Arx, aristaless related homeobox ( MGI:1097716)
Notes:The Arx probe used in this study by Miura et al., 1997 [PMID:9256348] was described by the authors as "a 975-bp fragment overlapping the homeobox". Editors note: not enough information is supplied to deduce the exact probe sequence.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Age:11 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:4% paraformaldehyde
Embedding:paraffin
Staining procedure:autoradiography
General Information
Authors:Miura H; Yanazawa M; Kato K; Kitamura K, 1997 [PMID:9256348] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(97)00062-2] [ PMID:9256348] Miura H, Yanazawa M, Kato K, Kitamura K 1997 Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Mech Dev (65):99-109
Links:MGI:3037504 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI