Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:3776

Casz1 castor homolog 1, zinc finger (Drosophila) ( MGI:1196251)
TS14 (9.0 dpc)
in situ hybridisation

Data Images
EMAGE:3776
Fig2E.Copyright: Reprinted with permission from Elsevier from [ [doi:10.1016/S0925-4773(02)00282-4] Mech Dev 118: 265-8, Vacalla CM; Theil T, Cst, a novel mouse gene related to Drosophila Castor, exhibits dynamic expression patterns during neurogenesis and heart development. Copyright 2002

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
The arrowhead points to expression in the floor plate.
Expression Pattern Description
Spatial Annotation:
EMAGE:3776Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3776_wholemount_strong_3D_1.wlz
3776_wholemount_moderate_3D_1.wlz
3776_wholemount_weak_3D_1.wlz
3776_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3776_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
central nervous system
detected detected
regionalExpression in the neural folds extends anteriorly towards the isthmus and posteriorly into the caudal neural tube.
neural tube floor plate
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1049357
Entity Detected:Casz1, castor homolog 1, zinc finger (Drosophila) ( MGI:1196251)
Sequence:sense strand is shown

>MGI:1049357
CGGTTCACAAGCAAGCTGTATGTGATCCGACATTACAACATGCACAAGAAGCGCGACAACTCCCTGCAGC
ACGGCTTCATGCGCTTCAGCCCGCTGGACGACTGCAGTGTCTACTACCACGGCTGCCACCTCAATGGGAA
GAGCACCCACTACCACTGCATGCAGGTGGGATGTAACAAGGTATACACAAGTACATCGGATGTGATGACT
CACGAGAACTTCCACAAGAAGAACACCCAGCTCATCAACGATGGCTTCCAGCGCTTCCGAGCCACCGAGG
ACTGCGGCACGGCTGACTGTCAGTTCTACGGACAGAAGACCACACACTTCCACTGCAGGCGCCCTGGCTG
CACATTCACCTTCAAGAACAAGTGTGACATCGAGAAGCACAAGAGCTACCACATCAAGGATGATGCCTAC
GCCAAGGACGGCTTCAAGAAGTTCTACAAGTACGAGGAGTGCAAGTACG
Notes:The Casz1 (Cst/castor) probe used in this study by Vacalla & Theil, 2002 [PMID:12351199] is described as being "derived from image clone 2936937 encoding part of the Cst zinc finger domain which is 50% homologous to the Drosophila Castor zinc finger domains."
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.0 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Vacalla CM; Theil T, 2002 [PMID:12351199] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(02)00282-4] [ PMID:12351199] Vacalla CM, Theil T 2002 Cst, a novel mouse gene related to Drosophila Castor, exhibits dynamic expression patterns during neurogenesis and heart development. Mech Dev (118):265-8
Links:MGI:3589586 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI