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EMAGE:3791

Eomes eomesodermin homolog (Xenopus laevis) ( MGI:1201683)
TS07 (5.0 dpc)
in situ hybridisation

Data Images
EMAGE:3791
Fig1A.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(98)00243-3] Mech Dev 81: 199-203, Ciruna BG; Rossant J, Expression of the T-box gene Eomesodermin during early mouse development. Copyright 1999

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotation: ee - extraembryonic ectoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:3791Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3791_wholemount_strong_3D_1.wlz
3791_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3791_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
extraembryonic component
detected detected
regionalExpression was strong in the extraembryonic ectoderm.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2450620
Entity Detected:Eomes, eomesodermin homolog (Xenopus laevis) ( MGI:1201683)
Notes:The Eomes probe used in this study by Ciruna & Rossant, 1999 [PMID:10330500] is described as follows: "Novel T-box motifs were amplified by PCR from an E7.5 primitive streak cDNA library (generous gift from Dr. Jonathan Pearce) using degenerate primers encoding amino acid sequences GTEMIITK and NPFAKGFR. Amplification products were analyzed by PAGE and amplicons in the expected size range (about 500 bp) were eluted from gel slices, subcloned and sequenced. An isolated amplicon encoding the mEomes T-box was used as a probe for whole mount RNA in situ hybridizations. A mEomes 3' RACE product, containing sequence downstream of the T-box including 3' UTR, was also used as an in situ probe and gave identical results. Editors Note: it is not specified which of these two probes was used in this actual sample.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:5.0 dpc
Theiler Stage:TS07
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Ciruna BG; Rossant J, 1999 [PMID:10330500] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(98)00243-3] [ PMID:10330500] Ciruna BG, Rossant J 1999 Expression of the T-box gene Eomesodermin during early mouse development. Mech Dev (81):199-203
Links:MGI:2450703 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI