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EMAGE:3879

Pax2 paired box gene 2 ( MGI:97486)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3879 EMAGE:3879
Figure 2D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2003.11.001] Gene Expr Patterns 4: 297-301, Bulfone A; Caccioppoli C; Pardini C; Faedo A; Martinez S; Banfi S, Pcp4l1, a novel gene encoding a Pcp4-like polypeptide, is expressed in specific domains of the developing brain. Copyright 2004. Figure 2J. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2003.11.001] Gene Expr Patterns 4: 297-301, Bulfone A; Caccioppoli C; Pardini C; Faedo A; Martinez S; Banfi S, Pcp4l1, a novel gene encoding a Pcp4-like polypeptide, is expressed in specific domains of the developing brain. Copyright 2004.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3879Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3879_wholemount_strong_3D_1.wlz
3879_wholemount_moderate_3D_1.wlz
3879_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3879_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future hindbrain
detected detected
regionalExpression is at the isthmus.
future midbrain
detected detected
regionalExpression is at the isthmus.
rhombomere 01 roof plate
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3041408
Entity Detected:Pax2, paired box gene 2 ( MGI:97486)
Notes:The Pax2 probe used in this stdy by Bulfone et al., 2004 [PMID:15053978] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Bulfone A; Caccioppoli C; Pardini C; Faedo A; Martinez S; Banfi S, 2004 [PMID:15053978] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2003.11.001] [ PMID:15053978] Bulfone A, Caccioppoli C, Pardini C, Faedo A, Martinez S, Banfi S 2004 Pcp4l1, a novel gene encoding a Pcp4-like polypeptide, is expressed in specific domains of the developing brain. Gene Expr Patterns (4):297-301
Links:MGI:3041411 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI