Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:3925

Gata4 GATA binding protein 4 ( MGI:95664)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3925
Fig7C. Copyright: Reprinted with permission from Elsevier from [doi:10.1006/dbio.1996.0165] Dev Biol 177: 309-22, Morrisey EE; Ip HS; Lu MM; Parmacek MS, GATA-6: a zinc finger transcription factor that is expressed in multiple cell lineages derived from lateral mesoderm. Copyright 1996

Expression pattern clarity: two stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: A - atria; V - ventricle; ST - septum transversum.
Expression Pattern Description
Spatial Annotation:
EMAGE:3925EMAGE:3925Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3925_voxel_strong_3D_1.wlz
3925_voxel_moderate_3D_1.wlz
3925_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3925_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
heart atrium
detected detected
primitive ventricle
detected detected
septum transversum
strong strong
hindgut
detected detected
regionalExpression is present in cells lining the midgut and hindgut regions.
midgut
detected detected
regionalExpression is present in cells lining the midgut and hindgut regions.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3590482
Entity Detected:Gata4, GATA binding protein 4 ( MGI:95664)
Sequence:sense strand is shown

>MGI:3590482
GAATTCCCCCGAGGCTCAGCCGCAGTTGCAGCTCCGCGACTCACGGAGATCGCGCCGGTTTTCTGGGAAA
CTGGAGCTGGCCAGGACTGCCGCTTCGCTTCGAAGGGACCGGGCCCTCTTTGTCATTCTTCGCTGGAGCC
GCTCTGGAGCTAGCAGCTGCGCCTGGGTGTGTTAGCAGGCAGAAAGCAAGGACTAGGCTTCTTTAGCCGG
TGGGTGATCCGAAGGCCTGCTCAGGGTGTTCGAGACCAGCCTGGACTGCGTCTGGGCACCTCCAGCCTCT
GGGCCCTGGAATAGAGTCCGCCCTCCCGCAGCATTTCTGGAGCAACCGAAACTCCAATTTGGGATTTTCT
TTTTCCTGAGCAAACCAGAGCCTAGAGGTTTCTGCTTTGATGCTGGATTTAATTCGTATATATTGAGCGA
GTTGGGCCTCTCCTCGTTTTTTGATCTCCGGTTGTTTTTTTTTTGGGGGGGGGTTAGTTTTTGGGTTTTT
TTTTGTTTTGTTTTGTTTTGATTTTTGGTGACAGTTCCGAGCACCCGCATTCTAGTTCTTGTCTGCCTCG
TGCTCAGAGCTTGGGGCGATGTACCAAAGCCTGCCATGGCCGCCAACCACGGCCCCCCGCCCGGCGCCTA
CGAAGCAGGTGGCCCTGGCGCCTTCATGCACAGGACGGGCGCCGCGTCCTCGCCCGTCTACGTGCCACTC
CGCGGGTGCCGTCCTCTGTGCTGGGCCTGTCCTACCTGCAGGGCGGTGGCAGTGCCGCTGCAGCTGGAAC
CACCTCGGGTGCAGCTCCGGGGCCGGCCCGTCGGGTGCAGGGCCTGGGACCCAGCAGGGTAGCCCTGGCT
GGAGCCAAGCTGGAGCCGAGGGAGCCGCCTACACCCCGCCGCCCGTGTCCCCGCGCTTCTCTTTCCCGGG
GACTACTGGGTCCCTGGCGGCCGCTGCCGCCGCTGCCGCAGCCCGGGAAGCTGCAGCCTACGGCAGTGGC
GGCGGGGCGGCGGGCGCTGGTCTGGCTGGCCGAGAGCAGTACGGGCGTCCGGGCTTCGCCGGCTCCTACT
CCAGCCCCTACCCAGCCTACATGGCCGACGTGGGAGCATCCTGGGCCGCAGCCGCTGCCGCCTCTGCCGG
CCCCTTCGACAGCCCAGTCCTGCACAGCCTGCCTGGACGGGCCAACCCTGGAAGACACCCCAATCTCGAT
ATGTTTGATGACTTCTCAGAAGGCAGAGAGTGTGTCAATTGTGGGGCCATGTCCACCCCACTCTGGAGGC
GAGATGGGACGGGACACTACCTGTGCAATGCCTGTGGCCTCTATCACAAGATGAACGGCATCAACCGGCC
CCTCATTAAGCCTCAGCGCCGCCTGTCCGCTTCCCGCCGGGTAGGCCTCTCCTGTGCCAACTGCCAGACT
ACCACCACCACGCTGTGGCGTCGTAATGCCGAGGGTGAGCCTGTATGTAATGCCTGCGGCCTCTACATGA
AGCTCCATGGGGTTCCCAGGCCTCTTGCAATGCGGAAGGAGGGGATTCAAACCAGAAAACGGAAGCCCAA
GAACCTGAATAAATCTAAGACGCCAGCAGGTCCTGCTGGTGAGACCCTCCCTCCCTCCAGTGGTGCCTCC
AGCGGTAACTCCAGCAATGCCACTAGCAGCAGCAGCAGCAGTGAAGAGATGCGCCCCATCAAGACAGAGC
CCGGGCTGTCATCTCACTATGGGCACAGCAGCTCCATGTCCCAGACTTCAGTCTGTGTCCGGCCACGGGC
CCTCCATCCATCCAGTGCTGTCTGCTCTAAGCTGTCCCCACAAGGCTATGCATCTCCTGTCACTCAGACA
TCGCAGGCCAGCTCCAAGCAGGACTCTTGGAACAGCCTGGTCCTGGCTGACAGTCATGGGGACATAATCA
CCGCGTAATCAGCGCCCCCCCTTCCCTCTTCAAATTCCTGCTCGGACTTGGGACGTGGGGGCCAGCAAAG
TAAAAGGCTGGGGCACCCTTGGCCAGCCCCTTTGTCTGGGAACAACTCCTGAAGAACAACTGGGTAGAAC
TTGAAGTTGTTGACAATCACTTAGGATATGGGTGTTCCGGGTTGTTCAAACACCTTTCCAGGTGGAGCTC
TGGAAAAGCCTGCGTTCTTACAGAGAAGCCCACCTTGGCTGCAAGCACAGCACAGTGAGGCAGAGACTTC
TTCCTTCCTTATTCTCCACCTGCCTGGGAATTC
nt 1 - nt 2203 of M98339.1
Notes:The Gata-4 probe used in this study by Morrisey et al., 1996 [PMID:8660897] is described as the 1.7-kb murine GATA-4 cDNA (Arceci et al., 1993 [PMID:8455608] ). Editors note: Arceci et al., state that the nucleotide sequence of the full length clone is M98339.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Morrisey EE; Ip HS; Lu MM; Parmacek MS, 1996 [PMID:8660897] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1006/dbio.1996.0165] [ PMID:8660897] Morrisey EE, Ip HS, Lu MM, Parmacek MS 1996 GATA-6: a zinc finger transcription factor that is expressed in multiple cell lineages derived from lateral mesoderm. Dev Biol (177):309-22
 [ PMID:8455608] Arceci RJ, King AA, Simon MC, Orkin SH, Wilson DB 1993 Mouse GATA-4: a retinoic acid-inducible GATA-binding transcription factor expressed in endodermally derived tissues and heart. Mol Cell Biol (13):2235-46
Links:MGI:3590509 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI