EMAGE mouse gene expression spatial database

EMAGE:4035

Zic1 zinc finger protein of the cerebellum 1 ( MGI:106683)
TS10 (late-streak Downs & Davies)
in situ hybridisation

Data Images


Figure 3B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2004.03.003] Gene Expr Patterns 4: 505-11, Elms P; Scurry A; Davies J; Willoughby C; Hacker T; Bogani D; Arkell R, Overlapping and distinct expression domains of Zic2 and Zic3 during mouse gastrulation. Copyright 2004.

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Expression Pattern Description

Spatial Annotation:

Annotation colour key:

wholemount mapping

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Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

embryo

not detected

homogeneous

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	MGI:3526554
Entity Detected:	Zic1, zinc finger protein of the cerebellum 1 ( MGI:106683)
Notes:	The Zic1 probe used in this study by Elms et al., 2004 [PMID:15261827] was "generated from a BMAP clone that contained bases 1948-2947 of mouse Zic1 3'UTR (NM_009573) cloned into pT7T3D-pac (Pharmacia). An antisense riboprobe was generated to this clone by digestion with XhoI and transcription with T3 RNA polymerase". Editors note: on Feb 9 2004 NM_009573.2 replaced NM_009573.1. These two sequence versions vary by 100+ nt in length at the 5' end and it is not reported which version Elms refer to. Exact probe sequence is unknown from the author's description.
Chemistry:	RNA
Strand:	antisense

Specimen

Procedures

Fixation:

4% paraformaldehyde

General Information

Authors:	Elms P; Scurry A; Davies J; Willoughby C; Hacker T; Bogani D; Arkell R, 2004 [PMID:15261827] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/j.modgep.2004.03.003] [ PMID:15261827] Elms P, Scurry A, Davies J, Willoughby C, Hacker T, Bogani D, Arkell R 2004 Overlapping and distinct expression domains of Zic2 and Zic3 during mouse gastrulation. Gene Expr Patterns (4):505-11
Links:	MGI:3526651 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source