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EMAGE:4046

Bnip3 BCL2/adenovirus E1B interacting protein 3 ( MGI:109326)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4046
Figure 1A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2005.04.009] Gene Expr Patterns 6: 94-101, Machka C; Kersten M; Zobawa M; Harder A; Horsch M; Halder T; Lottspeich F; Hrabe de Angelis M; Beckers J, Identification of Dll1 (Delta1) target genes during mouse embryogenesis using differential expression profiling. Copyright 2005.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Black arrows point to segmented expression.
Expression Pattern Description
Spatial Annotation:
EMAGE:4046Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4046_wholemount_strong_3D_1.wlz
4046_wholemount_moderate_3D_1.wlz
4046_wholemount_weak_3D_1.wlz
4046_wholemount_possible_3D_1.wlz
4046_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4046_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
limb
detected detected
trunk mesenchyme
detected detected
regionalSegmented expression along the anterior-posterior axis of the trunk region.
tail unsegmented mesenchyme
detected detected
regionalExpression is in the posterior presomitic mesoderm.
embryo
weak weak
Expression is in most cells throughout the embryo.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3617168
Entity Detected:Bnip3, BCL2/adenovirus E1B interacting protein 3 ( MGI:109326)
Notes:The Bnip3 probe used in this study by Machka et al., 2005 [PMID:15979417] was made from a "mouse arrayTAG library plasmid (MG-6-16k15 in pBluescript KS)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + BMpurple
General Information
Authors:Machka C; Kersten M; Zobawa M; Harder A; Horsch M; Halder T; Lottspeich F; Hrabe de Angelis M; Beckers J, 2005 [PMID:15979417] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2005.04.009] [ PMID:15979417] Machka C, Kersten M, Zobawa M, Harder A, Horsch M, Halder T, Lottspeich F, Hrabe de Angelis M, Beckers J 2005 Identification of Dll1 (Delta1) target genes during mouse embryogenesis using differential expression profiling. Gene Expr Patterns (6):94-101
Links:MGI:3617185 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI