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EMAGE:4059

Onecut2 one cut domain, family member 2 ( MGI:1891408)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4059 EMAGE:4059
Figure 2C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00110-8] Gene Expr Patterns 3: 639-44, Jacquemin P; Pierreux CE; Fierens S; van Eyll JM; Lemaigre FP; Rousseau GG, Cloning and embryonic expression pattern of the mouse Onecut transcription factor OC-2. Copyright 2003. Figure 2D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00110-8] Gene Expr Patterns 3: 639-44, Jacquemin P; Pierreux CE; Fierens S; van Eyll JM; Lemaigre FP; Rousseau GG, Cloning and embryonic expression pattern of the mouse Onecut transcription factor OC-2. Copyright 2003.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Lateral view. D is a dorsal view of the embryo in C. ov, otic vesicle. The boxed area indicates expression in the foregut-midgut endoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:4059Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4059_wholemount_strong_3D_1.wlz
4059_wholemount_moderate_3D_1.wlz
4059_wholemount_weak_3D_1.wlz
4059_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4059_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
central nervous system
strong strong
foregut
detected detected
regionalExpression is in the foregut-midgut endoderm and in the hepatic and pancreatic buds.
foregut-midgut junction
detected detected
regionalExpression is in the foregut-midgut endoderm and in the hepatic and pancreatic buds.
midgut
detected detected
regionalExpression is in the foregut-midgut endoderm and in the hepatic and pancreatic buds.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2682928
Entity Detected:Onecut2, one cut domain, family member 2 ( MGI:1891408)
Sequence:sense strand is shown

>MGI:2682928
GGGCATGAGCAACACCTACACTACGCTGGCGCCGCTCCAGCCGCTGCCACCCATCTCTACGGTCTCAGAC
AAGTTCCACCACCCGCACCCTCACCACCACCCTCACCACCACCATCACCACCACCATCACCATCAGCGTC
TGTCCGGCAACGTCAGTGGCAGCTTCACTCTCATGCGGGACGAGCGCGGGCTTCCGTCCATGAACAACCT
TTACAGCCCTTACAAGGAGATGCCTAGTATGAGCCAGAGCCTGTCTCCATTGGCTGCCACGCCGCTGGGC
AACGGGCTGGGTGGCCTTCACAATGCTCAGCAGAGCCTGCCCAACTACGGTCCGCCGGGCCATGACAAAA
TGCTCAGCCCCAATTTCGACGCGCACCACACTGCCATGCTGACCCGCGGTGAGCAACACCTGTCCCGAGG
CCTGGGCACCCCGCCTGCGGCCATGATGTCTCACCTCAATGGCTTACACCACCCTGGCCACACTCAGTCC
CACGGGCCAGTGCTGGCTCCTAGCCGTGAGCGGCCCCCTTCGTCCTCCTCGGGTTCTCAGGTGGCCACGT
CCGGGCAGCTGGAAGAGATCAACACCAAAGAGGTGGCCCAGCGTATCACCGCCGAGCTGAAGCGCTACAG
CATCCCGCAGGCGATCTTCGCACAGAGGGTTCTATGCCGGTCTCAGGGGACTCTCTCCGACCTGCTCCGG
AATCCCAAACCCTGGAGTAAACTCAAATCTGGCAGGGAGACCTTCCGCAGGATGTGGAAGTGGCTGCAGG
AGCCCGAGTTCCAGCGCATGTCTGCCTTACGCCTGGCAGCATGCAAACGCAAAGAGCAAGAACCAAACAA
AGACAGGAACAACTCGCAGAAGAAATCCCGCCTGGTGTTCACGGACCTCCAACGCCGAACACTCTTCGCC
ATCTTCAAGGAAAATAAGCGCCCTTCGAAGGAGATGCAGATCACCATTTCCCAGCAACTTGGGCTGGAGC
TGACCACTGTCAGTAACTTCTTCATGAATGCCCGGCGTCGCAGCCTGGAGAAATGGCAAGATGACCTAGG
CACAGGGGGTTCTTCATCCACCTCCAGCACTTGTACCAAAGCATGATGCAAGGACTCTCCACCTGGGCAC
AAGTCATCTCCAAATGAGGACAACACATACCAAAAACCAAAACCAAAAACCAAAACCAAAACCAAAACCA
AAACCAAAACCAAAAAAAAAAAAAAAAAAAAAAAAA
nt 439 - nt 1664 of AY242995.1
Notes:The Onecut2 probe used in this study by Jacquemin et al., 2003 [PMID:12971999] "spans nucleotides 439 to 1664 of the mOc2 sequence (nucleotide numbering as in GenBank accession number AY242995)". Editor's note: only one version of AY242995 existed at the time of publication of this paper (AY242995.1),
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jacquemin P; Pierreux CE; Fierens S; van Eyll JM; Lemaigre FP; Rousseau GG, 2003 [PMID:12971999] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00110-8] [ PMID:12971999] Jacquemin P, Pierreux CE, Fierens S, van Eyll JM, Lemaigre FP, Rousseau GG 2003 Cloning and embryonic expression pattern of the mouse Onecut transcription factor OC-2. Gene Expr Patterns (2003):639-44
Links:MGI:2682929 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI