EMAGE mouse gene expression spatial database

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EMAGE:4106

Daam1 dishevelled associated activator of morphogenesis 1 ( MGI:1914596)
TS16 (9.5 dpc)
in situ hybridisation

Data Images


Figure 2C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2004.06.001] Gene Expr Patterns 5: 97-105, Nakaya MA; Habas R; Biris K; Dunty WC Jr; Kato Y; He X; Yamaguchi TP, Identification and comparative expression analyses of Daam genes in mouse and Xenopus. Copyright 2004.

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Notes:

Note: Scale bar =500 mmcrons. Abbreviations: V, trigeminal ganglia (cranial nerve V); VII and VIII, facio-acoustic ganglia (cranial nerve VII and VIII); IX, glossopharyngeal ganglia (cranial nerve IX); drg, dorsal root ganglia; fl, forelimb; s, somite.

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4106_wholemount_strong_3D_1.wlz

4106_wholemount_moderate_3D_1.wlz

4106_wholemount_weak_3D_1.wlz

4106_wholemount_notDetected_3D_1.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4106_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

trunk somite

detected

diencephalon

detected

future hindbrain

detected

optic cup intraretinal space

detected

facio-acoustic vii-viii ganglion complex

detected

glossopharyngeal ix ganglion

detected

trigeminal v ganglion

detected

dorsal root ganglion

strong

1st branchial pouch

detected

1st branchial arch mandibular component mesenchyme derived from neural crest

detected

1st branchial arch maxillary component mesenchyme derived from neural crest

detected

2nd branchial pouch

detected

2nd branchial arch mesenchyme derived from neural crest

detected

3rd branchial pouch

detected

3rd branchial arch mesenchyme derived from neural crest

detected

forelimb bud mesenchyme

weak

homogeneous

hindlimb bud mesenchyme

weak

homogeneous

optic cup

detected

lens pit

detected

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	MGI:3525596
Entity Detected:	Daam1, dishevelled associated activator of morphogenesis 1 ( MGI:1914596)
Sequence:	sense strand is shown >MGI:3525596 GTAACCAGATTCATCGACTTGGATGGCCTGTCATGTATTCTCAACTTTCTGAAGACCATGGACTATGAGA CCTCTGAGTCTCGGATACACACCTCCCTCATTGGCTGTATAAAGGCACTAATGAACAACTCTCAAGGCCG GGCCCATGTCCTGGCTCATTCTGAGAGTATCAATGTAATTGCTCAGAGTCTGAGCACAGAGAACATTAAA ACAAAGGTGGCCGTGCTGGAAATCCTGGGCGCTGTGTGCCTGGTTCCTGGGGGCCACAAGAAAGTTCTGC AAGCTATGCTGCACTACCAGAAGTATGCCAGCGAGAGAACCCGCTTCCAGACGTTAATTAATGACTTGGA TAAAAGCACTGGGCGTTATCGGGATGAAGTAAGTCTCAAGACGGCCATCATGTCCTTCATCAATGCAGTG CTGAGCCAGGAGCCGGAGTGGAGAGTTTGGACTTCAGGCTCCATCTTCGCTATGAATTTCTGATGTTAGG AATTCAACCTGTTATAGATAAATTAAGGGAACATGAAAATTCAACACTAGACAGGCATTTAGACTTTTTT GAAATGCTCCGAAATGAAGATGAACTAGAATTTGCCAAAAGATTTGAACTGGTTCACATAGACACAAAAA GCGCCACTCAGATGTTTGAGCTGACCAGGAGGAGGCTAACCCACAGGAAGCTAACCCCAATTCATGTCCA TTCTGCACCATGGCTCCAGATGCCTTACAAGAGGAGTGGTACACCCGGTCAGACTGGCTGTGTTAAAAGA ATCCTACAGGAGAATGTATCCGAATGACAAGGGGGATCCAATCCAACTCTGGAACTTATTCAGAACGTCG TAGAATTGG
Notes:	The Daam1 probe used in this study by Nakaya et al., 2004 [PMID:15533824] was "synthesized from EST BF540113 which encodes the 5' end of mDaam1 in pCMV-SPORT6 NotI/SalI sites". Editors note: "EST BF540113"= the 5' sequence tag from IMAGE clone 4189404.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Age:	9.5 dpc
Theiler Stage:	TS16
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

Fixation:

4% paraformaldehyde

General Information

Authors:	Nakaya MA; Habas R; Biris K; Dunty WC Jr; Kato Y; He X; Yamaguchi TP, 2004 [PMID:15533824] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/j.modgep.2004.06.001] [ PMID:15533824] Nakaya MA, Habas R, Biris K, Dunty WC, Kato Y, He X, Yamaguchi TP 2004 Identification and comparative expression analyses of Daam genes in mouse and Xenopus. Gene Expr Patterns (5):97-105
Links:	MGI:3525571 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source