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EMAGE:4112

Fam101b family with sequence similarity 101, member B ( MGI:1923816)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4112
Figure 1L. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2004.09.002] Gene Expr Patterns 5: 439-44, Hirano M; Murata T; Furushima K; Kiyonari H; Nakamura M; Suda Y; Aizawa S, cfm is a novel gene uniquely expressed in developing forebrain and midbrain, but its null mutant exhibits no obvious phenotype. Copyright 2005.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: D, diencephalic region; M, mesencephalic region; ma, mandibular arch; rp, Rathke's pouch.
Expression Pattern Description
Spatial Annotation:
EMAGE:4112Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4112_wholemount_strong_3D_1.wlz
4112_wholemount_moderate_3D_1.wlz
4112_wholemount_weak_3D_1.wlz
4112_wholemount_possible_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4112_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
diencephalon
detected detected
regionalExpression is in the dorsal thalamus.
future midbrain
weak weak
1st branchial arch
detected detected
regionalExpression is in the rostral aspect.
rathke's pouch
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3575275
Entity Detected:Fam101b, family with sequence similarity 101, member B ( MGI:1923816)
Notes:The 1500005K14Rik (cfm) probe used in this study by Hirano et al., 2005 [PMID:15661651] was described by the authors as a "950-bp fragment, corresponding to the 3' part of the cfm [1500005K14Rik] gene (146-345a.a.) and its 3' untranslated region". Editors Note: GenBank Information (XP_898485.2) suggests that the 1500005K14Rik/cfm protein is 216aa in length - ambigious information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Hirano M; Murata T; Furushima K; Kiyonari H; Nakamura M; Suda Y; Aizawa S, 2005 [PMID:15661651] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2004.09.002] [ PMID:15661651] Hirano M, Murata T, Furushima K, Kiyonari H, Nakamura M, Suda Y, Aizawa S 2005 cfm is a novel gene uniquely expressed in developing forebrain and midbrain, but its null mutant exhibits no obvious phenotype. Gene Expr Patterns (5):439-44
Links:MGI:3575279 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI