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EMAGE:4114

Sez6l seizure related 6 homolog like ( MGI:1935121)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4114
Figure 4B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2005.03.003] Gene Expr Patterns 5: 619-28, Ferguson DA; Chiang JT; Richardson JA; Graff J, eXPRESSION: An in silico tool to predict patterns of gene expression. Copyright 2005.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: The anterior neural tissue of the embryos is indicated by arrows.
Expression Pattern Description
Spatial Annotation:
EMAGE:4114Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4114_wholemount_strong_3D_1.wlz
4114_wholemount_moderate_3D_1.wlz
4114_wholemount_possible_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4114_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future brain
detected detected
regionalExpression is in the anterior neural tissue.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:287940
Entity Detected:Sez6l, seizure related 6 homolog like ( MGI:1935121)
Notes:The Sez6l probe used in this study by Ferguson et al., 2005 [PMID:15939374] was generated from "plasmids obtained from the IMAGE consortium (Research Genetics)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Ferguson DA; Chiang JT; Richardson JA; Graff J, 2005 [PMID:15939374] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2005.03.003] [ PMID:15939374] Ferguson DA, Chiang JT, Richardson JA, Graff J 2005 eXPRESSION: an in silico tool to predict patterns of gene expression. Gene Expr Patterns (5):619-28
Links:MGI:3619664 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI