Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4116

Prrx1 paired related homeobox 1 ( MGI:97712)
TS21 (13.5 dpc)
in situ hybridisation

Data Images
EMAGE:4116 EMAGE:4116

Expression pattern clarity: no stars
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:PRX1_probeA
Entity Detected:Prrx1, paired related homeobox 1 ( MGI:97712)
Sequence:sense strand is shown

>PRX1_probeA
GCCAGGATGAAGGTTTCAGATGACTTCCAACAACTGCCTTCCAAGATTCTGCTCTCCTTAGAAAACACTT
TTCATTTATAATTTCTCTTCCTTGCCTATAATCCAAATATTTAAGCTATTCTCTACAAACGCTAAATTCC
CGGTTTACCAGTCTCTTGGACCTGTACTCACTTACAAATCAAAAAACATTTTTACAATAAGGATGTACTG
GTTTTTTTGAAATGTGATAACACGCAGCAATCGATGGGACAAATACATGAGTGGAGATAAAAACAAGTAA
TGTATATTAAGCCAGACCACATAAACTATTCTGAAAGAAATGCTTTAATAGTAGTTGTTGAGAAGGAATC
ACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTATTACTGAACAAAGTACAAAATCACTTGAA
ATATATTTTCAGATGGGTGCCTGTTAGACTGGGGAAAAAAAATCACCATTAACACAGCCAGATATGCCAA
GGGAAGA
nt 165082904 - nt 165082408 of NC_000067.4
Notes:Primers used to PCR generate the probe template from mouse genomic DNA: Forward 5' AATTAACCCTCACTAAAGGTCTTCCCTTGGCATATCTGG (T3 sense) Reverse 5' TAATACGACTCACTATAGGGCCAGGATGAAGGTTTCAGA (T7 antisense) Probe length- 497bp
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:13.5 dpc
Theiler Stage:TS21
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Jacqueline Ramsay, David R FitzPatrick
Principal investigator:David R FitzPatrick, Medical Research Council, Human Genetics Unit MRC Western General Hospital Crewe Road, Edinburgh, Scotland EH4 2XU
Submitted by:Jacqueline Ramsay, Medical Research Council, Human Genetics Unit MRC Western General Hospital Crewe Road, Edinburgh, Scotland EH4 2XU
Experiment type:screen
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceFACEBASE