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EMAGE:4134

Dixdc1 DIX domain containing 1 ( MGI:2679721)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4134
Figure 1K. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2005.06.013] Gene Expr Patterns 6: 325-30, Soma K; Shiomi K; Keino-Masu K; Masu M, Expression of mouse Coiled-coil-DIX1 (Ccd1), a positive regulator of Wnt signaling, during embryonic development. Copyright 2006.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Forelimb bud (fl); h, heart. Arrow indicates the signal in the cephalic mesenchyme.
Expression Pattern Description
Spatial Annotation:
EMAGE:4134Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4134_wholemount_strong_3D_1.wlz
4134_wholemount_moderate_3D_1.wlz
4134_wholemount_possible_3D_1.wlz
4134_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4134_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
head mesenchyme
strong strong
regionalExpression in the cephalic mesenchyme is stronger in the rostral region.
branchial arch
detected detected
forelimb bud
detected detected
tail
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3620705
Entity Detected:Dixdc1, DIX domain containing 1 ( MGI:2679721)
Sequence:sense strand is shown

>MGI:3620705
GTTGACTCAGCAGGACACATCTGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCAAATATGGATAAGGAT
GAGCTGCACAACCAGAACGTGGATCTGCAGAGGAAGCTAGAGGAGAGGAACCGGCTCTTAGGAGAATATA
AAAAAGAGTTGGGGCAGAAGGACCGCCTCTTTCAGCAGCAGCAGGCCAAGTTGGAAGAGGCGCTTCGGAA
ACTCTCGGACGCCAGTTACCAGCAGGTGGATCTAGAACGGGAGCTAGAGCAGAAAGATGTCCTTCTGGCT
CACTGCATGAAAGGAGAGACAGATGAGGTGACAAATTACAACAGTCACAGTTCTCAGCGCAATGGCTTTG
TCCTTCCCGTGGCAGGAAGAGGCGCCACTACTGTCACCCACAGAGGGCCACAGACCAGTGACCTCCAGCT
CGTCCGAGATGCTCTCCGCAGCCTGCGCAACAGCTTCAGTGGCCATGACCCTCAGCATCACACCATTGAC
AGCCTGGAGCAGGGAATCTCTAGCCTCATGGAGCGTCTGCATGTCGTAGAGACACAGAAGAAACAAGAAA
GGAAGGTTGGGGGGCGGTCACCCAGAAATCAAGCAAGCAGTGAATACCGGGCATCCTGGCCCCCTAATTC
AACGTTGCCTCACTCCCAGAGTTCCCCAGCCGTCAGCAGCACCTGCACTAAGGTGCTCTATTTCACCGAC
CGCTCGCTCACGCCCTTCATGGTCAATATTCCAAAGAGGTTGGGGGAGGTGACACTGAAGGATTTTAAAG
CAGCTATTGATCGGGAAGGGAATCACCGATACCACTTCAAAGCACTGGATCCCGAGTTTGGCACAGTCAA
AGAAGAGGTTTTCCATGATGACGATGCCATCCCTGGATGGGAAGGGAAAATCGTAGCCTGGGTGGAAGAA
GACCATAGAGAGAATTAACGAGACCCTGGCCACTCCCTGGCTGCTTCTCTCAGGAAAGAGGACTAACACC
AGAGTACGCTGAGAAGTTTCTAATTCGTGCTGCCAAAAAGAAGCTT
nt 1339 - nt 2364 of NM_178118.1
Notes:The Dixdc1 (Ccd1) probe used in this study by Soma et al., 2006 [PMID:16378754] was a "pan-Ccd1 probe (nucleotides 1,339 to 2,364 of Ccd1Ab1L: GenBank database accession number MN178118)". Editor's note: MN178118 is s typographical error which should read NM_178118.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:ICR
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP or BM purple
General Information
Authors:Soma K; Shiomi K; Keino-Masu K; Masu M, 2006 [PMID:16378754] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2005.06.013] [ PMID:16378754] Soma K, Shiomi K, Keino-Masu K, Masu M 2006 Expression of mouse Coiled-coil-DIX1 (Ccd1), a positive regulator of Wnt signaling, during embryonic development. Gene Expr Patterns (6):325-30
Links:MGI:3620756 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI