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EMAGE:4136

Apcdd1 adenomatosis polyposis coli down-regulated 1 ( MGI:3513977)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4136
Figure 3A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2004.03.006] Gene Expr Patterns 4: 755-62, Jukkola T; Sinjushina N; Partanen J, Drapc1 expression during mouse embryonic development. Copyright 2004.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: di, diencephalon; fl, forelimb bud; hl, hindlimb bud; mb, midbrain; ov, otic vesicle.
Expression Pattern Description
Spatial Annotation:
EMAGE:4136Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4136_wholemount_strong_3D_1.wlz
4136_wholemount_possible_3D_1.wlz
4136_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4136_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future midbrain
detected detected
gradedExpression is stronger in the dorsal and posterior side.
diencephalon
detected detected
gradedExpression is stronger in the ventral thalamus.
otocyst
strong strong
forelimb bud
detected detected
hindlimb ridge
detected detected
cardiovascular system
weak weak
regionalExpression is in blood vessels in the vascular plexus surrounding brain neuroepithelium.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:963627
Entity Detected:Apcdd1, adenomatosis polyposis coli down-regulated 1 ( MGI:3513977)
Sequence:sense strand is shown

>MGI:963627
CTGACAAGGAGATCTGTGGAGTTTTTCTCCAAGTGAACCAATCCCCTGTGTCCTGGCTCACACTGTGGTT
AGGGTGGGCACATCCACTCTGCCATCTTTAACACACAGAAACCAAACATCAGTGCTCCAGTAGCTTACTA
ATGGAAAGAGGTTGGGGTGAGACTCACCAGCAGATGAGCCACTCTGCTAGGAGCCAGCTGTCCCTGTGCT
CCTTGGTGGGGTCTAGGAGGAGTCACCCTGTTACTAGAATTACCAGCTTGATTCGGCTTCCTCTCTGCAT
TTCCCTGGTTCTGCCCCACCTGCGAGGTCCAGAGCCATCTCATTCAGGGTTCGCCGCTTCACAGTCATCC
GAAGGAGGGAGGGGATGGCCGCCACCATTCCTTTGTATTATTGCAACTGGTG
Notes:The Apcdd1 (Drapc1/EIG180) probe used in this study by Jukkola et al., 2004 [PMID:15465500] was "derived from I.M.A.G.E consortium CloneID: 1764103, Eig180, GenBank accession number NM_133237".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Jukkola T; Sinjushina N; Partanen J, 2004 [PMID:15465500] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2004.03.006] [ PMID:15465500] Jukkola T, Sinjushina N, Partanen J 2004 Drapc1 expression during mouse embryonic development. Gene Expr Patterns (4):755-62
Links:MGI:3526254 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI