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EMAGE:4159

Npas3 neuronal PAS domain protein 3 ( MGI:1351610)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4159 EMAGE:4159
Figure 3E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00182-3] Mech Dev 88: 237-41, Brunskill EW; Witte DP; Shreiner AB; Potter SS, Characterization of npas3, a novel basic helix-loop-helix PAS gene expressed in the developing mouse nervous system. Copyright 1999. Figure 3B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00182-3] Mech Dev 88: 237-41, Brunskill EW; Witte DP; Shreiner AB; Potter SS, Characterization of npas3, a novel basic helix-loop-helix PAS gene expressed in the developing mouse nervous system. Copyright 1999.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: tel, telencephalon; nt, neural tube. E - lateral view, B - dorsal view of 10.5dpc embryos.
Expression Pattern Description
Spatial Annotation:
EMAGE:4159Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4159_wholemount_strong_3D_1.wlz
4159_wholemount_possible_3D_1.wlz
4159_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4159_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
central nervous system
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1351843
Entity Detected:Npas3, neuronal PAS domain protein 3 ( MGI:1351610)
Sequence:sense strand is shown

>MGI:1351843
CGAATAACTGCCCAGCATCCTCTGCCCAACCAATCAGAATGTAGGAAAATCTACAGATATGACGGAATCT
ACTGTGAATCTACCTACCAGAATTTACAAGCACTGAGAAAGGAGAAATCCAGAGATGCTGCTCGATCCCG
CCGGGGAAAAGAAAATTTTGAGTTCTATGAATTGGCCAAGCTGTTGCCTCTTCCTGCCGCCATCACCAGC
CAGCTCGACAAGGCATCCATCATCCGACTTACAATTAGTTATCTCAAGATGAGAGACTTTGCCAACCAAG
GGGATCCTCCATGGAACCTGAGGATGGAAGGCCCTCCACCAAACACCTCAGTAAAAGGTGCACAACGAAG
GCGGAGCCCCAGCGCACTGGCCATTGAAGTATTTGAAGCACATTTGGGAAGCCACATTTTGCAGTCCCTG
GATGGCTTCGTATTTGCACTAAATCAAGAAGGAAAATTTTT
nt 70 - nt 530 of AF173871.1
Notes:The Npas3 probe used in this study by Brunskill et al., 1999 [PMID:10534623] covered "nucleotides 70-530" of the cDNA. Editor's note: the GenBank ID of the Npas3 cDNA AF137871 indicated in the article contains a typographical error which should read AF173871.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Brunskill EW; Witte DP; Shreiner AB; Potter SS, 1999 [PMID:10534623] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(99)00182-3] [ PMID:10534623] Brunskill EW, Witte DP, Shreiner AB, Potter SS 1999 Characterization of npas3, a novel basic helix-loop-helix PAS gene expressed in the developing mouse nervous system. Mech Dev (88):237-41
Links:MGI:2674152 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI