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EMAGE:4170

Hes6 hairy and enhancer of split 6 (Drosophila) ( MGI:1859852)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4170
Figure 3A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(00)00443-3] Mech Dev 98: 133-7, Vasiliauskas D; Stern CD, Expression of mouse HES-6, a new member of the Hairy/Enhancer of split family of bHLH transcription factors Copyright 2000.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Brackets indicate myotomes. Arrows indiacte dorsal root ganglia. Arrowheads indicate the spinal cord.
Expression Pattern Description
Spatial Annotation:
EMAGE:4170Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4170_wholemount_strong_3D_1.wlz
4170_wholemount_moderate_3D_1.wlz
4170_wholemount_weak_3D_1.wlz
4170_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4170_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
forelimb bud
detected detected
hindlimb bud
detected detected
future spinal cord
detected detected
dorsal root ganglion
detected detected
trunk somite
detected detected
regionalExpression is in the myotome.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:236901
Entity Detected:Hes6, hairy and enhancer of split 6 (Drosophila) ( MGI:1859852)
Sequence:sense strand is shown

>MGI:236901
CGGGCTGCGACCCACCTCGCTGAGTAGTTTGCACTAGGGCGCCGGGCTCCGTAGACCATGGCTCCGTCCC
AGGCGCCCAGCCGGGACCGTGCAGGCCAGGAGGATGAGGACCGCTGGGAAGCACGGGGGGACCGCAAGCC
CGGAAGCCCCTGGTGGAGAAGAAGCGACGCGCACGGATCAACGAGAGTCTTCAGGAGCTGCGGCTGCTGC
TGGCCGGTACCGAGGTGCAGGCCAAGCTAGAGAACGCCGAGGTTCTGGAGCTGACCGTGAGGCGCGTGCA
GGGCCGCTGCGAGGCCGGGCGCCGAGCGGAGCAGCTGCAGGCTGAAGCAAGCGAGCGCTTCGCTGCTGGC
TACATCCAGTGCATGCATGAGGTGCACACGTTCGTGTCCACGTGCCAAGCCATCGATGCCACTGTCTCAG
CTGAA
Notes:The Hes6 probe used in this study by Vasiliauskas & Stern, 2000 [PMID:11044617] "was produced by transcription with T3 RNA polymerase using IMAGE clone 385069 (1.3 kb)".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Vasiliauskas D & Stern CD, 2000 [PMID:11044617] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(00)00443-3] [ PMID:11044617] Vasiliauskas D, Stern CD 2000 Expression of mouse HES-6, a new member of the Hairy/Enhancer of split family of bHLH transcription factors. Mech Dev (98):133-7
Links:MGI:2387000 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI