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EMAGE:4197

Il17rd interleukin 17 receptor D ( MGI:2159727)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4197
Figure 2O. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(02)00018-7] Mech Dev 113: 163-8, Lin W; Furthauer M; Thisse B; Thisse C; Jing N; Ang SL, Cloning of the mouse Sef gene and comparative analysis of its expression with Fgf8 and Spry2 during embryogenesis. Copyright 2002.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: asterisk, branchial arches.
Expression Pattern Description
Spatial Annotation:
EMAGE:4197Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4197_wholemount_strong_3D_1.wlz
4197_wholemount_moderate_3D_1.wlz
4197_wholemount_weak_3D_1.wlz
4197_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4197_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
limb
detected detected
future forebrain
detected detected
trunk somite
detected detected
tail
detected detected
future midbrain
detected detected
regionalExpression is in the mid/hindbrain boundary region and extends posterior to the isthmus.
future hindbrain
detected detected
regionalExpression is in the mid/hindbrain boundary region and extends posterior to the isthmus.
telencephalon
detected detected
regionalExpression is in the commissural plate.
1st branchial pouch
detected detected
regionalExpression is in the extreme lateral region.
2nd branchial pouch
detected detected
regionalExpression is in the extreme lateral region.
3rd branchial pouch
detected detected
regionalExpression is in the extreme lateral region.
1st branchial groove ectoderm
detected detected
1st branchial arch mandibular component mesenchyme
detected detected
1st branchial arch maxillary component mesenchyme
detected detected
2nd branchial groove ectoderm
detected detected
2nd branchial arch mesenchyme
detected detected
3rd branchial groove ectoderm
detected detected
3rd branchial arch mesenchyme
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3039739
Entity Detected:Il17rd, interleukin 17 receptor D ( MGI:2159727)
Sequence:sense strand is shown

>MGI:3039739
CCCACGCGTCCGGCGTACGGCCATGGCCCCGTGGCTGCAGCTCTGCTCCTTCTTCTTCACTGTCAACGCC
TGTCTCAACGGCTCGCAGCTGGCAGTGGCCGCGGGCGGCTCCGGCCGCGCGAGGGGCGCGGACACCTGTG
GCTGGAGGGGAGTGGGGCCGGCCAGCAGGAACAGCGGACTGCACAACATCACCTTCAGATACGACAACTG
TACCACCTACTTGAATCCCGGCGGGAAGCATGCGATTGCTGATGCTCAGAACATCACCATCAGCCAGTAC
GCTTGCCACGACCAGGTGGCAGTCACCATTCTTTGGTCCCCAGGGGCCCTTGGCATTGAATTCCTAAAAG
GATTCCGAGTCATCCTGGAGGAGCTGAAGTCGGAGGGCAGACAGTGCCAACAGCTGATTCTAAAGGACCC
CAAACAGCTCAACAGCAGCTTCAGAAGGACTGGAATGGAATCTCAGCCTTTCCTGAATATGAAATTTGAG
ACGGATTACTTTGTAAAGATTGTCCCTTTCCCTTCCATTAAAAATGAAAGCAATTACCATCCCTTCTTCT
TCAGAACACGGGCCTGTGACCTGTTGTTACAACCTGACAACTTGGCCTGTAAGCCTTTCTGGAAGCCTCG
AAACCTGAATATCAGCCAGCATGGTTCTGACATGCACGTGTCCTTCGACCATGCCCCGCAGAACTTCGGC
TTCCGTGGCTTCCATGTTCTCTATAAGCTCAAGCACGAAGGCCCCTTCAGGCGGAGGACTTGCAGGCAGG
ACCAGAATACAGAGACAACCAGCTGCCTCCTCCAAAACGTTTCTCCAGGGGACTATATCATTGAGCTGGT
GGATGACAGCAACACCACCAGGAAAGCTGCTCAGTATGTGGTGAAGTCAGTGCAGTCTCCCTGGGCTGGA
CCCATCAGAGCTGTGGCCATCACTGTGCCTCTGGTTGTCATATCTGCGTTCGCAACCCTGTTCACTGTGA
TGTGCAGAAAGAAGCAACAAGAAAATATATATTCACATTTAGATGAAGAAAGCCCGGAGTCGTCCACATA
CGCTGCGGCTCTCCCCAGAGACAGGCTCCGGCCTCAGCCCAAGGTCTTCCTCTGCTACTCCAATAAAGAT
GGCCAGAATCACATGAACGTGGTCCAGTGTTTCGCCTATTTCCTGCAAGATTTCTGTGGCTGTGAGGTGG
CTCTGGACTTGTGGGAAGATTTCAGCCTCTGCAGAGAGGGGCAGAGAGAATGGGCCATTCAGAAGATCCA
CGAGTCCCAGTTCATCATTGTCGTGTGCTCCAAAGGCATGAAGTACTTTGTAGATAAGAAGAACTTCAGA
CACAAAGGAGGCAGCCGCGGCGAGGCGCAAGGCGAGTTCTTCCTGGTGGCCGTGGCAGCCATTGCTGAGA
AGCTCCGTCAGGCCAAGCAGAGCTCATCTGCCGCACTGCGCAAGTTCATCGCCGTCTACTTCGATTATTC
CTGTGAAGGGGATGTACCCTGCAGCCTGGACCTGAGCACCAAGTACAAGCTCATGGACCACCTTCCTGAG
CTCTGTGCCCATCTGCACTCAGGAGAGCAGGAGGTGCTGGGTCAGCACCCAGGCCACAGCAGCAGAAGGA
ACTACTTCCGGAGCAAATCGGGCCGCTCCCTGTATGTTGCCATTTGCAACATGCACCAGTTTATTGATGA
GGAGCCTGACTGGTTTGAGAAGCAGTTTATACCCTTCCAACATCCCCCTGTGCGCTACCAGGAGCCAGTC
CTGGAGAAATTTGACTCAGGCTTGGTTTTAAATGATGTCATAAGCAAACCAGGGCCAGAGAGTGACTTCT
GTCGGAAAGTCGAGGCTTGTGTACTTGGGGCCGCTGGGCCAGCCGACTCTTATTCATACCTGGAGAGTCA
GCATGTAGGCCTGGACCAAGACACTGAGGCCCAGCCCTCCTGTGATAGTGCCCCTGCCTTGCAGCCCCTG
TTACACGCAGTGAAAGCTGGCAGTCCCTCAGAGATGCCACGGGACTCAGGCATATATGATTCTTCTGTAC
CCTCATCAGAGCTCTCTCTGCCTCTGATGGAGGGACTCTCTCCGGATCAGATAGAAACATCTTCTCTGAC
CGAGAGTGTATCTTCCTCCTCTGGCCTAGGTGAGGAGGACCCCCCTACCCTCCCTTCCAAGCTCCTTGCC
TCTGGGGTGTCCAGAGAACATGGTTGCCACAGCCACACTGACGAACTGCAAGCGCTTGCTCCTTTGTAAG
GACTCGGAAGAGTCTAAGCATCGCCACTTTAGCTGCTGATCTCTCTGGCTCCCCAGTTCACCTCTGTGGT
TGTGCAGCCTACTTGGAGCTGAAGGCGCACACGGGGATATCTGGAATGAAATTCTGGCTAGCACTCGATC
TGTTCTGCTCCAGCCTTCTAAGGGATACTTAGCAAAGTCTCCAGTTTCCCAAAAGCATATGGAACCCTGA
AAGGCATGTCCATTAGATCTGACTGCAGCTGTCCATCTCAGACTGATCCTTGGATCTGAGCCTGCTCTGA
GAGGGGTAGAGTGGAAACAGGTAACGAGAAATAGGAAAGCTCCCACACAGCCTGCTCTGGCTTCACTTGA
ACTCTGGCTACTTAAACTCAAAATGCTTTGTGGAAAAGCCCTCTCGGCATCCTTACAGCTTACTTACCCA
TGTCAAGTACTGCTGGGACCCAGGCTGCGCTGCAGGTCATGTTTCTGTCCATTTTGATGTGGAAACTTAC
ACTGTCCTGAAGTGTTAAGTAAACCCTTGAGTCCAAGGTCCAGACAATGATTGAACATTCATCCAGTCAC
GTTTTGTAAAACAGCTCTCTCTCTCTTACTGGGAAACATGACCAACCAGGACAGAATCCTGTGGGGCTGG
ACCATCTTGTTTGTCCTACGTGAAACTGGCTTGATTAATGTGCAGACGTTGTCAGGACCTGGGCGTTTTC
CCTGCATCGAGGTAGCCATCTCATGGGAGCCTTAGCCATCTGTTTAGTTTCTCCCTGGGCTACATTTACT
GCTCTGTAGCTCGGGTGGTGACGGCTGGACGTGGAGGACTGCTATCCATTACTCAGCTGGGCAGCAACAT
TATTAGAATCGTGGTTTGTATTTTGGCTGGTGCCGTGTCTTGAATTTTAGAGGTCAGAATCCACTAATAC
TCGTCAGTGTACGGGAGACGGTGGCCAGTTAATCTGCTGGTTTTGACAAGTGACAAACCTCCTTTTCAGA
AGGCAGAAAGGAGGGGATTGTTACAAAAGTAAATGTTCTATTTTTATGAATGAATCTTGTACAGAAATTC
TGTTTCCAAAGGTAAACCATCTCTTCCTATCCTGTACCTTAATTAGATGTATATAACGATGAGTCTGTCT
CCCCCT
nt 1 - nt 3366 of AF459444.1
Notes:The Il17rd (Sef) probe used in this study by Lin et al., 2002 [PMID:11960706] was a "full-length cDNA". See Figure 1A. therein and accompanying GenBank submission AF459444.1 for the sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:CD-1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Lin W; Furthauer M; Thisse B; Thisse C; Jing N; Ang SL, 2002 [PMID:11960706] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(02)00018-7] [ PMID:11960706] Lin W, F�rthauer M, Thisse B, Thisse C, Jing N, Ang SL 2002 Cloning of the mouse Sef gene and comparative analysis of its expression with Fgf8 and Spry2 during embryogenesis. Mech Dev (113):163-8
Links:MGI:3040279 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE