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EMAGE:4241

Gad1 glutamic acid decarboxylase 1 ( MGI:95632)
TS18 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4241 EMAGE:4241 EMAGE:4241
Fig3C. Copyright: This image is from Maddox DM, BMC Dev Biol 2001;1(1):1, an open-access article, licensee BioMed Central Ltd. Fig3D. Copyright: This image is from Maddox DM, BMC Dev Biol 2001;1(1):1, an open-access article, licensee BioMed Central Ltd. Fig3E. Copyright: This image is from Maddox DM, BMC Dev Biol 2001;1(1):1, an open-access article, licensee BioMed Central Ltd.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: Fig3C: Black arrow indicates expression the forelimb, white arrow indicates expression in the hindlimb. Fig3D: White arrow indicates expression the proximal forelimb, and black arrow indicates expression in the apical ectodermal ridge. Fig3E: Arrow indicates expression in the hindlimb apical ectodermal ridge. Fig3D and 3E are higher magnifications of the forelimb and hindlimb respectively of the embryo shown in Fig3C.
Expression Pattern Description
Spatial Annotation:
EMAGE:4241Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4241_wholemount_strong_3D_1.wlz
4241_wholemount_moderate_3D_1.wlz
4241_wholemount_possible_3D_1.wlz
4241_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4241_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
forelimb bud
detected detected
regionalExpression is present in a diffuse stripe in the proximal forelimb.
forelimb bud apical ectodermal ridge
detected detected
hindlimb bud apical ectodermal ridge
detected detected
Expression is restricted to the apical ectoderm.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3653517
Entity Detected:Gad1, glutamic acid decarboxylase 1 ( MGI:95632)
Sequence:sense strand is shown

>MGI:3653517
CCAAGACCACCGAGCTGATGGCATCTTCCACTCCTTCGCCTGCAACCTCCTCGAACGCGGGAGCGGATCC
TAATACTACCAACCTGCGCCCTACAACGTATGATACTTGGTGTGGCGTAGCCCATGGATGCACCAGAAAA
CTGGGCCTGAAGATCTGTGGCTTCTTACAAAGGACCAATAGCCTGGAAGAGAAGAGTCGTCTTGTGAGCG
CCTTCAGGGAGAGGCAGTCCTCCAAGAACCTGCTTTCCTGTGAAAACAGTGACCAGGGTGCCCGCTTCCG
GCGCACAGAGACCGACTTCTCCAACCTGTTTGCTCAAGATCTGCTTCCAGCTAAGAACGGGGAGGAGCAA
ACTGCGCAGTTCTTGCTGGAAGTGGTAGACATACTCCTCAACTATGTCCGCAAGACATTTGATCACTCCA
CCAAGGTTCTGGATTTCCACCACCCACACCAGTTGCTGGAAGGCATGGAAGGCTTTAATTTGGAGCTGTC
TGACCACCCCGAGTCTCTGGAGCAGATCCTGGTTGACTGTAGAGACACCCTGAAGTACGGGGTTCGCACA
GGTCACCCTCGATTTTTCAACCAGCTCTCTACTGGTTTGGATATCATTGGTTTAGCTGGTGAATGGCTGA
CATCGACTGCCAATACCAATATGTTCACATATGAAATTGCACCCGTGTTTGTTCTCATGGAACAGATTAC
TCTTAAGAAGATGAGAGAGATCGTTGGATGGTCAAATAAAGATGGTGATGGGATATTTTCTCCTGGGGGA
GCCATATCCAATATGTACACGATCATGGCTGCTCGTTACAAGTACTTCCCAGAAGTGAAGACAAAAGGCA
TGGCGGCTGTGCCCAAACTGGTCCTCTTCACCTCAGAACACAGTCACTATTCCATAAAGAAAGCCGGGGC
TGCGCTTGGCTTTGGAACGGACAATGTGATTTTGATAAAGTGCAATGAAAGGGGGAAGATAATTCCGGCT
GATTTAGAGGCAAAAATTCTTGATGCCAAACAAAAGGGCTATGTTCCCCTTTATGTCAATGCAACCGCAG
GCACGACTGTTTACGGAGCATTCGATCCAATCCAGGAAATTGCGAGCATATGTGAGAAATACAACCTTTG
GCTGCATGTGGATGCTGCCTGGGGTGGTGGACTGCTCATGTCCCGGAAGCACCGCCACAAACTCAGCGGC
ATAGAAAGGGCCAATTCAGTCACCTGGAACCCTCACAAGATGATGGGCGTGCTGCTCCAGTGCTCTGCCA
TTCTGGTCAAGGAAAAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGCTACCTCTTCCAGCCAGA
CAAGCAGTATGACGTCTCCTATGACACCGGGGACAAGGCGATTCAGTGTGGCCGCCATGTGGACATCAAC
AAGTTCTGGCTGATGTGGAAAGCAAAGGGCACCGTGGGATTTGAAAACCAGATCAACAAATGCCTGGAGC
TGGCTGATTACCTCTACGCCAAGATTAAAAACAGAGAAGAGTTTGAGATGGTTTTCGATGGTGAGCCTGA
GCACACAAATGTCTGTTTCTGGTACATTCCACAAAGCCTTCGAGGGGTTCCAGATAGCCCTGAGCGACGA
GAAAAGCTACACAGGGTGGCTCCCAAGATCAAAGCTCTGATGATGGAGTCAGGAACAACCATGGTGGCAT
ACCAGCCTCAAGGGGACAAGGCCAACTTCTTCCGGATGGTCATCTCTAACCCAGCCGCCTCCCAGTCTGA
CATCGATTTCCTCACCGAGGAGATAGAGAGGTTGGGTCAGGATCTGTAATCCCTCTTTACAGAACCAGAA
TCATCGGCCATGCTTGTGCCCCTCTGGTACCCTAGAGCACAGCTCTGTCAGTAGCTGACACATCTAGGCC
ATCTCACTGAAGGAAATTACAATCTCTTAAAGAATATTTGTCACATTT
nt 104 - nt 2041 of Z49976.1
Notes:The Gad1 probe used in this study by Maddox & Condie, 2001 [PMID:11178105] is described as follows: "The Gad1 probe was derived from an EST clone (accession W59173). Its 5' end corresponds to nucleotide 142 in exon 1 (Szabo et al., 1996 [PMID:8985122] ) and the 3' end is at nucleotide 2041 in the cDNA sequence (Katarova et al., 1990" [PMID:12106047] , Z49976.1). Editors note: Pair-wise BLAST of W59173 against Z49976.1 places the 5' end of the template fragment at position 104 in Z49976.1.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:Swiss Webster
Age:10.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Maddox DM; Condie BG, 2001 [PMID:11178105] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1089/dna.1996.15.1081] [ PMID:8985122] Szabo G, Katarova Z, Kortvely E, Greenspan RJ, Urban Z 1996 Structure and the promoter region of the mouse gene encoding the 67-kD form of glutamic acid decarboxylase. DNA Cell Biol (15):1081-91
 [ doi:10.1111/j.1460-9568.1990.tb00412.x] [ PMID:12106047] Katarova Z, Szabo G, Mugnaini E, Greenspan RJ 1990 Molecular Identification of the 62 kd Form of Glutamic Acid Decarboxylase from the Mouse. Eur J Neurosci (2):190-202
 [ doi:10.1186/1471-213X-1-1] [ PMID:11178105] Maddox DM, Condie BG. 2001 Dynamic expression of a glutamate decarboxylase gene in multiple non-neural tissues during mouse development. BMC developmental biology (1)
Links:MGI:3653586 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI