Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4263

Apln apelin ( MGI:1353624)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4263
FigS4B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2007.03.004] Dev Biol 305: 599-614, Kalin RE; Kretz MP; Meyer AM; Kispert A; Heppner FL; Brandli AW, Paracrine and autocrine mechanisms of apelin signaling govern embryonic and tumor angiogenesis. Copyright 2007

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: Somites indicated by arrow; intersomitic vessels indicated by arrowhead; region of prospective branchial arches IV-VI indicated by asterisk.
Expression Pattern Description
Spatial Annotation:
EMAGE:4263Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4263_wholemount_strong_3D_1.wlz
4263_wholemount_moderate_3D_1.wlz
4263_wholemount_possible_3D_1.wlz
4263_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4263_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trunk somite
detected detected
Expression is present in the somites.
cardiovascular system
detected detected
regionalExpression is present in the intersomitic vessels.
branchial arch
detected detected
regionalExpression is present in the region of prospective branchial arches IV-VI.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1613600
Entity Detected:Apln, apelin ( MGI:1353624)
Sequence:sense strand is shown

>MGI:1613600
GCAGGAGTGGGGCAGGCAGCCAGCGGTGCGGCTGGGGCGCTCACCCTCCCGCGGTCCGGGAGCCACGCGA
GCTCCGTGCCCGCACGCGCCAGCCCCGGCTCGCGCCTTTCTTTGCGTCCGGGTGCCCTGCCTCTCCGCCC
ACTCGCCGGCTCCTCTGGGCTGCCGCGGACCGAGTTGCAGCATGAATCTGAGGCTCTGCGTGCAGGCGCT
GCTGCTGCTCTGGCTCTCCTTGACTGCAGTTTGTGGAGTGCCACTGATGTTGCCTCCAGATGGAACAGGA
CTAGAAGAAGGAAGCATGCGCTACCTGGTGAAGCCCAGAACTTCGAGGACTGGACCAGGAGCCTGGCAGG
GAGGCAGGAGGAAATTTCGCAGACAGCGCCCCCGGCTCTCCCATAAGGGCCCCATGCCTTTCTAAAGCAG
GATTGAAGGGCTCGCCAAGTGCCCTCCCGGTGCCGGTCTCTCTACATCCACAGATGAATTCTCTTCTCTT
GGAACCCTCACATCTATTTGGCTTTCATCTTGCACCTGTTCTAGCTGCTGATGGTCCCGGCTCTTCTCAC
CCACCAAGTTCCTCTAATGGCGTGGTCTCGCCCCTCACTTGGATGATTTCATTCCTCTCACAAGGATCCC
TTTGGCCCATCCTCCTGTGCACTCTTTGGACTGGCCTTGTGAGACCCAGCTTCTCCTTGGAGCTGTTCCA
TGCGGGTAGTCCCTATCTTTCAGCCGTAGCCTTCTCTTGGCTCTTTCCTCTTTTCATTTGCCTTGGGCAC
TGGGACAGACACTCCGTCTCCGTGGGTCCCGGCCATTCAGTGTTCGTATCAGGGACCTCTGCCGGAAGGG
GCGCCAGAATTGCCACGGCGACCTCGGATGACAACCGGCCGCCGTCTAGGGGCCCAACAAGGGGACGGCG
GAAACCGACCAGGGGGCCCAGACAAGCGGGGCTGACACAAGGCGACACGCTCATCCACTCCGGCCGCATG
AGACAAACGAAGCGAGCCAAAATGCCAGCAGGCGAATGGCGCGCGCATGATACGGACATGACCACCAAGA
GAGACGCGACGACGCAACTGATGGCTAGACAACCGCCCATAACGACCGGGCGCTCTCCCGCCCGCCGACC
ACAGATCANN
Notes:The Apln probe used in this study by Kalin et al., 2007 [PMID:17412318] is described as "transcribed from linearized plasmid encoding mouse apelin (BG176301)." Editors note: The sequence accession ID given by the authors refers to the 5'-end EST read from IMAGE clone 4461088.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Kalin RE; Kretz MP; Meyer AM; Kispert A; Heppner FL; Brandli AW, 2007 [PMID:17412318] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.ydbio.2007.03.004] [ PMID:17412318] Kalin RE, Kretz MP, Meyer AM, Kispert A, Heppner FL, Brandli AW 2007 Paracrine and autocrine mechanisms of apelin signaling govern embryonic and tumor angiogenesis. Dev Biol (305):599-614
Links:MGI:3715008 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI