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EMAGE:4317

Nkx2-3 NK2 transcription factor related, locus 3 (Drosophila) ( MGI:97348)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4317
Figure 3A. Copyright: This image is from Pabst O, Dev Dyn 1997 May;209(1):29-35, and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Hybridising structures are highlighted by arrowheads.
Expression Pattern Description
Spatial Annotation:
EMAGE:4317Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4317_wholemount_strong_3D_1.wlz
4317_wholemount_possible_3D_1.wlz
4317_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4317_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
detected detected
regionalExpression is at the anterior margin.
1st branchial groove ectoderm
detected detected
2nd branchial groove ectoderm
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3588426
Entity Detected:Nkx2-3, NK2 transcription factor related, locus 3 (Drosophila) ( MGI:97348)
Sequence:sense strand is shown

>MGI:3588426
CTGTCGGCGCCCGAGCGCGAGCATCTCGCCAGCAGCCTGAAGCTCACGTCCACGCAGGTGAAAATCTGGT
TCCAGAATCGCAGGTACAAGTGCAAGAGACAGCGGCAGGATAAGTCCCTGGAGCTGGGGACGCACGCGCC
GCCGCCGCCACCCCGCCGCGTGGCAGTGCCGGTGCTCGTGCGGGACGGCAAGCCGTGCGTCACGCCCAGC
GCACAAACCTACGGCTCGCCCTACGGCGTGGGCGCCGGCGCCTACTCCTACAACAGCTTCCCCGCCTACG
GCTACGGGAACTCGGCCGCCGCAGCCGCTGCAGCCGCCGCAGCCGCAGCAGCAGCGGCGGCTTACAGCGG
CAGCTACGGCTGCGCCTATCCGACCGGTGGCGGCGGTGGTGGTGGCGGCACGGCCTCCGCGGCGACCACC
GCCATGCAACCCGCCTGCAGCGCCACCGGCGGTG
nt 34059952 - nt 34060405 of NW_001030643.1
Notes:The Nkx2-3 probe used in this study by Pabst et al., 1997 [PMID:9142493] was generated from "a genomic 450-bp KpnI/BamHI" fragment. Editors note: the start and end cordinates of this fragment with respect to the Mus musculus chromosome 19 genomic contig NW_001030643.1 were deduced using this information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Pabst O; Schneider A; Brand T; Arnold HH, 1997 [PMID:9142493] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/(SICI)1097-0177(199705)209:1<29::AID-AJA3>3.0.CO;2-Z] [ PMID:9142493] Pabst O, Schneider A, Brand T, Arnold HH 1997 The mouse Nkx2-3 homeodomain gene is expressed in gut mesenchyme during pre- and postnatal mouse development. Dev Dyn (209):29-35
Links:MGI:3588435 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI