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EMAGE:434

Fgf9 fibroblast growth factor 9 ( MGI:104723)
TS16 (10 dpc)
in situ hybridisation

Data Images
EMAGE:434
Figure 2E of Zhao et al., 2001 [PMID:11748141] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Abbreviations used: D-V, dorsal-ventral orientation; LP, lens pit; NR, neural retina; RPE, retinal pigment epithelium. The ventral region of the optic stalk is indicated by the yellow arrow, the dorsal region by the yellow arrowhead. Scale bar: 50 microns.
Expression Pattern Description
Spatial Annotation:
EMAGE:434EMAGE:434Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
434_voxel_strong_3D_1.wlz
434_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:434_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
optic cup inner layer
detected detected
Expression is present in the prospective neural retina.
optic cup outer layer
not detected not detected
There is no expression in the prospective retinal pigment epithelium (RPE).
optic stalk
detected detected
regionalExpression is present in the ventral but not the dorsal region of the stalk.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2157814
Entity Detected:Fgf9, fibroblast growth factor 9 ( MGI:104723)
Notes:The probe used in this study by Zhao et al., 2001 [PMID:11748141] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Age:10 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:10% formalin
Embedding:paraffin
Staining procedure:autoradiography
General Information
Authors:Zhao et al., 2001 [PMID:11748141] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11748141] Zhao S, Hung FC, Colvin JS, White A, Dai W, Lovicu FJ, Ornitz DM, Overbeek PA 2001 Patterning the optic neuroepithelium by FGF signaling and Ras activation. Development (128):5051-60
Links:MGI:2157823 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE