Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4349

Lrrc10 leucine rich repeat containing 10 ( MGI:2448063)
TS16 (12.5 dpc)
in situ hybridisation

Data Images
EMAGE:4349
Figure 2C. Copyright: This image is from Adameyko II, Dev Dyn 2005 Jun;233(2):540-52, and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Heart (arrow). The authors state that expression is heart-specific.
Expression Pattern Description
Spatial Annotation:
EMAGE:4349Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4349_wholemount_strong_3D_1.wlz
4349_wholemount_possible_3D_1.wlz
4349_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4349_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
heart
strong strong
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3581828
Entity Detected:Lrrc10, leucine rich repeat containing 10 ( MGI:2448063)
Sequence:sense strand is shown

>MGI:3581828
CACTCCCTGACAGAGTTGGTGGGCAGGGGCTCGCCTTGCAGCCCGTTTCACATGGGAAACACCATCCGGG
CCTTCGTGGCTTTCATCCCCACCGACCGCTGCCAGAGTTATGTGGTGGGAGACCTCCGGGAGATGCCCCT
GGACAGGATGGTGGATCTGAGCGGGAGCCAGCTGCGTCGCTTCCCACTGCACGTGTGCTCCTTCACGGAG
CTGGTGAAGCTCTACCTCAGCGACAACCACCTTCACAGCCTGCCTCCCGACCTGGCACAGCTGCAGAACC
TGCAGATCCTGGCCTTGGATTTCAACAACTTCAAAGCTCTCCCCCGGGTGGTGTGTACCTTGAAACAGCT
CTGCATCCTCTACCTGGGCAATAACAAACTCTGTGACCTCCCGGATGAGCTCAGCCTGCTCCAGAACCTA
CGGACCCTGTGGCTCGAATCCAACTGCCTCACCCGGCTGCCCGATGTGGTGTGTGAGCTGAGTCTCCTTA
AAACCCTGCATGCCGGTTCCAACGCCCTACGTCTGCTACCCGGCCAGCTCCGGCGCCTGCGCGAGCTCAG
GACCATCTGGCTCTCCGGCAATCAGCTAGCTGACTTCCCCTCGGTACTGCTTCGCATGCCCTTTCTGGAG
GTGATCGACGTGGATCGGAACAGTATCCGCTACTTCCCCAGCCTGGCCCACTTGACAAATCTGAAGCTGG
TCATCTATGACCACAATCCTTGCAGAAATGCCCCCAAGGTGGGCAAAGGGGTTCGCCGTGTTGGGAGATG
GGCAGAGGAGACACCAGAGCCTGACCCCAGAAAAGCTAGGCGGTACGCACTGGCCAAGGAAGAGAATCAA
GAGCCACCTCCTCCCCTTCTTCCTTCCAGCTCTTGAACAGCTGAGGTTGAAGGCCAATTCAAAGGTTACC
CCACTGCTCCGAAGGCATCTCATTAGAGCGGAAGGGATGGTCCTGGCTCATCCCAGGGCTGATGGAGAGA
AAGCCAGGTGAGATGCTGTAAAGGAATAGGGCGAAGAAAACATTTCCAGCCCCCAGCACCTCTTCCTAGG
GGGAAGGTGTGTGCTGTTGCTGGCCTGGAATCCAGGGTGACTGTCACTCCTGTGCCAGAAGCAGTTCCTT
CACACGAGCTATTTTGAAACACCAAAGAACAAGACCAGCCACAGCACTCTTCCACCACGCAGGAGTAGCT
GGTCACAAGGCTGGTGAGTGCTTCAAAGACTGTATTTGTTAAAATAAAGAAAACAACGCCACCAGCTGCT
CAGTGGCCTGTCTCTAGCTCTCTCTAGCTCTCATGCCTCTTTCCTTCCCGAGAACTTCTGCATAGTACCA
ATGTACTGCTGTTACTAATTTGGTTCCTGAAAGGGACAACTCTACC
nt 18 - nt 1393 of NM_146242.1
Notes:The Lrrc10 (Serdin1) probe template used in this study by Adameyko et al., 2005 [PMID:15830381] was "amplified from the embryonic mouse heart cDNA library", "using primers LRP1-5 5'-CAC TCC CTG ACA GAG TTG GTG-3' and LRP1-3 5'-GGT AGA GTT GTC CCT TTC AGG-3'".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:Swiss Webster
Age:12.5 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Adameyko II; Mudry RE; Houston-Cummings NR; Veselov AP; Gregorio CC; Tevosian SG, 2005 [PMID:15830381] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.20368] [ PMID:15830381] Adameyko II, Mudry RE, Houston-Cummings NR, Veselov AP, Gregorio CC, Tevosian SG 2005 Expression and regulation of mouse SERDIN1, a highly conserved cardiac-specific leucine-rich repeat protein. Dev Dyn (233):540-52
Links:MGI:3581893 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI