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EMAGE:4351

Foxi2 forkhead box I2 ( MGI:3028075)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4351
Figure 2J. Copyright: This image is from Ohyama T, Dev Dyn 2004 Nov;231(3):640-6, and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4351Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4351_wholemount_strong_3D_1.wlz
4351_wholemount_moderate_3D_1.wlz
4351_wholemount_possible_3D_1.wlz
4351_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4351_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
detected detected
regionalExpression is restricted to the posterior edges
2nd branchial arch
detected detected
regionalExpression is restricted to the posterior edges
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3580865
Entity Detected:Foxi2, forkhead box I2 ( MGI:3028075)
Sequence:sense strand is shown

>MGI:3580865
CTGTGCTCCTGGCATCATCAGTGCTCCTGTTACAGAACCTCGCTGTCCCCAGACCACAGAGAGGCTGGCA
CTTAGGAAACCCTGGGCAGCTTTGGGTTTGCCTTACTTGACCGCTGCTCCCACCCCCTACCCCCACCATC
GCCATCACCGCCCACACTCACTAAAGCTCACCTGAGGCAGGTGGGTGACCACACCTGTTTTTGGTTTCTC
TCTACTCCTGCCTCCTCCCTTGCTGTGACTGCTCTCAGGCAGAATCCTGAGAACTTCCTCCAGAATTTAA
CTCTCCAGCCTTTCCAAGCCTGTTTATATTCAGTGACTGGCTTTTGGACCTCTGTGCTTTCAGGAGCTCC
TTGAGGTCCCAGCTGTTATAAGTCTTTGTGTCACCTGGCATTTTCTGGGGACATGGACACTGGCCATGGA
CCCATACTATGCCAGGACAGATGGGAGGAGTACTTTCCCTGGAAGAGAGCAGAGAGGGAAGTCTTAAGCC
AGACCAGTCTTGCCCTTTAGTGAGCCCAGCCCCACTTGCACCAACAGGGCAAGTCTGCCTTGGACTATCT
CCAATCTGCCTACTGGGAGAGCCATGGTCCTCTGAACCTGCGGTGCTCAGGATGCAGGAATGGGGTCCTG
CTCCCCAACCCTGCCTCCTGTTTGCTGCGTGTTGTTCCTACCTGGTGTGCTGTGGTTAACCAAGCTTACA
GTCAACCCATACTC
nt 1554 - nt 2267 of NM_183193.1
Notes:The Foxi2 probe used in this study by Ohyama & Groves, 2004 [PMID:15376323] was generated by RT-PCR using the following primers: "5'-CTGTGCTCCTGGCATCATCAG-3', 5'-GAGTATGGGTTGACTGTAAGC-3' (Foxi2, 0.7 kb)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Staining procedure:alkaline phosphatase + INT/BCIP
General Information
Authors:Ohyama T & Groves AK, 2004 [PMID:15376323] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.20160] [ PMID:15376323] Ohyama T, Groves AK 2004 Expression of mouse Foxi class genes in early craniofacial development. Dev Dyn (231):640-6
Links:MGI:3580868 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI