Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4356

Mib1 mindbomb homolog 1 (Drosophila) ( MGI:2443157)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4356
Figure 3I. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.mod.2005.06.005] Mech Dev 122: 1106-17, Barsi JC; Rajendra R; Wu JI; Artzt K, Mind bomb1 is a ubiquitin ligase essential for mouse embryonic development and Notch signaling. Copyright 2005.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4356Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4356_wholemount_strong_3D_1.wlz
4356_wholemount_moderate_3D_1.wlz
4356_wholemount_weak_3D_1.wlz
4356_wholemount_possible_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4356_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
branchial arch
detected detected
tail unsegmented mesenchyme
detected detected
nervous system
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3652831
Entity Detected:Mib1, mindbomb homolog 1 (Drosophila) ( MGI:2443157)
Sequence:sense strand is shown

>MGI:3652831
CTTCCCATCCCGTTGTCGCTGAGGAGCACCTCGCAGTTCCTCACGAGGCGCCGCTCGGGCCTGGACGCGG
CTGTACCCGGATGTGGAGCCGCTCTCGCCCGGCGGGGACTCGGTGGCGGGGCGGAGCGCGGCGGCGTGCG
CGGGGGCTGAGGGAAGCGGGCCCCGGGGCCCCGGCTCCGGCCGCTCGCCGGCCGCTAGCGCCGCTGCCCA
TCGCGGAGCCGGCTCCCGGGCGTCCAGGCCCGAGTGAGCGGCCGGGGGCCGCTGAGGGCCGGCGGCTCGC
CTGGCCTCCCGCTGCGCTCGCCCCTGCACCGGGGCGAGCCTCCCCCGGCCCTCCGCGCTCCTGGCCGGGG
GAGAGCGAGGTTTGCTGGCGGCCGTCGCTGTAGCCCGGCCGGGGAGTCCGGGGCAAGCGGCAGAGCCCCC
GCCCACGGCCGCTCGCCCTCGGCCTGCAATCCGCCGCCTGCGAGCCTCCGCGGGCGGGCCTCCAGTCGGA
GCGGGGGCCGCGACGGCCACGGCCCGGCCCGGGCGAAAGGCTGCTCGTGGACCGCGCCGCCGCCGCCCCG
GTAAGTCGGCCCCACGGCCCGCGGGGCTCGCTGCCGCCCCCGCCGGCGTCCAGAGTGCGGCCCGGGCCCA
GTTCTCTCACGATTCCCCCGCCGGCGGCGGCGCCCACCGTCCGGGCCCCAATGAGTAACTCCCGCAACAA
CCGAGTGATGGTGGAGGGGGTCGGCGCCCGCGTAGTGCGCGGCCCGGACTGGAAGTGGGGCAAGCAGGAC
GGCGGCGAGGGCCATGTAGGCACTGTACGGAGCTTCGAGAGTCCGGAGGAGGTCGTGGTGGTGTGGGACA
ACGGCACGGCCGCCAACTACCGCTGCTCAGGGGCCTACGACCTGCGTATCCTGGACAGCGCGCCCACCGG
CATCAAGCATGATGGAACTATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAATGT
GCAGAGTGCACCAATTATGATTTGTGCACTGTTTGTTATCATGGAGATAAACATCACTTAAGGCATCGCT
TTTATAGGATTACTACACCAGGAAGTGAACGGGTTCTGTTAGAGTCTCGTAGAAAATCTAAGAAGATTAC
AGCCAGAGGAATCTTTGCTGGTGCCAGAGTGGTGCGAGGAGTGGACTGGC
nt 1 - nt 1170 of NM_144860.2
Notes:The Mib1 probe template used in this study by Barsi et al., 2005 [PMID:16061358] is described by the authors as being "cloned using Mib1 primers specific to the first 1170 bp by RT-PCR from E9.5 RNA (current NCBI Accession No. NM-144860". Editors Note: NM_144860.2 (3793bp) replaced NM_144860.1 (1443bp) on Jun 25 2003. It is assumed that on publication in 2005, the authors were referring to NM_144860.2.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Staining procedure:alkaline phosphatase + BMpurple
General Information
Authors:Barsi JC; Rajendra R; Wu JI; Artzt K, 2005 [PMID:16061358] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.mod.2005.06.005] [ PMID:16061358] Barsi JC, Rajendra R, Wu JI, Artzt K 2005 Mind bomb1 is a ubiquitin ligase essential for mouse embryonic development and Notch signaling. Mech Dev (122):1106-17
Links:MGI:3652842 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI