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EMAGE:4424

Rpn1 ribophorin I ( MGI:98084)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4424
Fig7F (#29, Rpn1). Tateossian H; Powles N; Dickinson R; Ficker M; Maconochie M, "Determination of downstream targets of FGF signalling using gene trap and cDNA subtractive approaches." Exp Cell Res 2004 Jan 1;292(1):101-14. [PMID:14720510]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4424Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4424_wholemount_moderate.wlz
4424_wholemount_weak.wlz
4424_wholemount_strong.wlz
4424_wholemount_possible.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4424_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
regionalIn the embryo, expression was widespread. In the head, expression was prominent in the craniofacial region.
neural tube
detected detected
genitourinary system
detected detected
regionalExpression was detected in the urogenital sinus.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3757743
Entity Detected:Rpn1, ribophorin I ( MGI:98084)
Notes:The Rpn1 (#29) probe used in this study by Tateossian et al., 2004 [PMID:14720510] is of undescribed sequence, yet the authors state that it belongs to UniGene cluster Mm.22333 and BC016080 is an identifier sequence for the gene (see Table 2 therein). Editors note: Mm.22333 has been retired and replaced by Mm.188544 (Ribophorin I).
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:(C57BL/6 x CBA)F1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Tateossian H; Powles N; Dickinson R; Ficker M; Maconochie M, 2004 [PMID:14720510] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.yexcr.2003.08.008] [ PMID:14720510] Tateossian H, Powles N, Dickinson R, Ficker M, Maconochie M 2004 Determination of downstream targets of FGF signalling using gene trap and cDNA subtractive approaches. Exp Cell Res (292):101-14
Links:MGI:3757845 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE