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EMAGE:4429

Ckb creatine kinase, brain ( MGI:88407)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4429
Supplementary Fig 7J. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2006.05.002] Dev Biol 297: 141-157, Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Copyright 2007

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4429Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4429_wholemount_strong_3D_1.wlz
4429_wholemount_moderate_3D_1.wlz
4429_wholemount_possible_3D_1.wlz
4429_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4429_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
central nervous system
detected detected
regionalCkb is widely expressed in the developing CNS, but absent at the boundary between midbrain and hindbrain.
midbrain
detected detected
regionalExpression is widespread in the CNS but absent from the midbrain-hindbrain boundary.
hindbrain
detected detected
regionalExpression is widespread in the CNS but absent from the midbrain-hindbrain boundary.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Ckb cloneA
Entity Detected:Ckb, creatine kinase, brain ( MGI:88407)
Sequence:sense strand is shown

>Ckb cloneA
AGGCATCCATCGCCCCTGCTTCGTCCGGCATCCCGCCCGCTGCCGCCGCCATGCCCTTCTCCAACAGCCA
TAATACGCAGAAGCTGCGCTTCCCGGCCGAGGATGAGTTCCCTGATCTGAGCAGCCACAACAACCATATG
GCCAAGGTGCTGACCCCGGAGCTGTACGCCGAGCTCCGTGCCAAGTGCACGCCGAGCGGCTTTACTTTGG
ACGACGCCATTCAGACTGGCGTAGACAATCCGGGCCACCCGTACATCATGACTGTGGGTGCAGTGGCGGG
CGACGAGGAGAGTTACGACGTATTCAAGGACCTCTTCGACCCCATTATTGAGGAGCGGCACGGCGGCTAC
CAGCCCAGTGATGAGCACAAGACCGACCTCAACCCAGACAACCTGCAGGGTGGCGATGACCTGGACCCCA
ACTACGTGCTGAGCTCGCGAGTGCGCACAGGCCGCAGCATCCGCGGCTTCTGTCTCCCCCCGCACTGCAG
CCGCGGGGAGCGCCGCGCCATCGAGAAGCTGGCAGTAGAAGCTCTGTCCAGCCTAGATGGCGACCTGTCT
GGCAGGTACTACGCGCTCAAGAGCATGACTGANGCGGAGCAGCAGCAGCTCATTGACGACCACTTCCTCT
TCGATAAGCCTGTGTCGCCTCTGCTGCTGGCCTCCGGCATGGNCCGCGACTGGCCGGATGCTCGTGGCAT
ATGGCACAATGACAATAAGACTTTCCTGGTGTGGATTAACGAGGAGGACCACCTGCGAGTCATCTCCATG
CAGAAGGGGGGCAACATGAANGGAGTGTTCACCCGATTCTGCACCGGCCTCACTCAGATCGAAACTCCTC
TTNCAGTCCAAGAACTATGAGTTCATGTGGAAATCCTCACCTGGGCTACATCCTCACATGGCCATCCAAC
CTGNGCACCGGACTG
Notes:The Ckb probe used in this study by Jukkola et al., 2006 [PMID:16782087] was synthesized from the insert of IMAGE:6395794.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, 2006 [PMID:16782087] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2006.05.002] [ PMID:16782087] Jukkola T, Lahti L, Naserke T, Wurst W, Partanen J 2006 FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Dev Biol (297):141-57
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE