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EMAGE:4438

Ngfr nerve growth factor receptor (TNFR superfamily, member 16) ( MGI:97323)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4438
Supporting Fig7G. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2006.05.002] Dev Biol 297: 141-157, Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Copyright 2007

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4438Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4438_wholemount_strong_3D_1.wlz
4438_wholemount_moderate_3D_1.wlz
4438_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4438_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
midbrain
detected detected
gradedExpression was detected as dorsal and ventral gradients in R1 and midbrain, being absent near the boundary.
rhombomere 01
detected detected
gradedExpression was detected as dorsal and ventral gradients in R1 and midbrain, being absent near the boundary.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Ngfr cloneA
Entity Detected:Ngfr, nerve growth factor receptor (TNFR superfamily, member 16) ( MGI:97323)
Notes:The Ngfr (p75) probe used in this study by Jukkola et al., 2006 [PMID:16782087] is that previously described by Qun et al., 1999 [PMID:10842601] .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, 2006 [PMID:16782087] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2006.05.002] [ PMID:16782087] Jukkola T, Lahti L, Naserke T, Wurst W, Partanen J 2006 FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Dev Biol (297):141-57
 [ doi:10.1111/j.1749-6632.1999.tb08649.x] [ PMID:10842601] Qun LX, Pirvola U, Saarma M, Ylikoski J 1999 Neurotrophic factors in the auditory periphery. Ann N Y Acad Sci (884):292-304
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE