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EMAGE:4459

Ptprs protein tyrosine phosphatase, receptor type, S ( MGI:97815)
TS14 (9.0 dpc)
in situ hybridisation

Data Images
EMAGE:4459
Figure 1A t7822b10, 9.0. [doi:10.1101/gr.1362303] Genome Res. 13:2609-20. Sousa-Nunes R; Rana AA; Kettleborough R; Brickman JM; Clements M; Forrest A; Grimmond S; Avner P; Smith JC; Dunwoodie SL; Beddington RS. Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4459Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4459_wholemount_strong_3D_1.wlz
4459_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4459_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
not detected not detected
homogeneous
extraembryonic vascular system
not detected not detected
homogeneous
extraembryonic component
detected detected
Expression is in the yolk sac.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2683073
Entity Detected:Ptprs, protein tyrosine phosphatase, receptor type, S ( MGI:97815)
Notes:The Ptprs probe (t7822b10) used in this study by Sousa-Nunes et al., 2003 [PMID:14613977] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:either: C57BL/6 or (CBA/Ca x C57BL/10)F1
Age:9.0 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Sousa-Nunes R; Rana AA; Kettleborough R; Brickman JM; Clements M; Forrest A; Grimmond S; Avner P; Smith JC; Dunwoodie SL; Beddington RS, 2003 [PMID:14613977] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1101/gr.1362303] [ PMID:14613977] Sousa-Nunes R, Rana AA, Kettleborough R, Brickman JM, Clements M, Forrest A, Grimmond S, Avner P, Smith JC, Dunwoodie SL, Beddington RS 2003 Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection. Genome Res (13):2609-20
Links:MGI:2683405 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE