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EMAGE:4463

Sgk1 serum/glucocorticoid regulated kinase 1 ( MGI:1340062)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4463
Figure 1A s8609b60 9.5. [doi:10.1101/gr.1362303] Genome Res. 13:2609-20. Sousa-Nunes R; Rana AA; Kettleborough R; Brickman JM; Clements M; Forrest A; Grimmond S; Avner P; Smith JC; Dunwoodie SL; Beddington RS. Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4463Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4463_wholemount_moderate_3D_1.wlz
4463_wholemount_weak_3D_1.wlz
4463_wholemount_strong_3D_1.wlz
4463_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4463_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
detected detected
2nd branchial arch
detected detected
3rd branchial arch
detected detected
cardiovascular system
detected detected
regionalExpressed in blood vessels.
esophageal region vascular element
detected detected
pharynx vascular element
detected detected
rest of foregut vascular element
detected detected
foregut-midgut junction vascular element
detected detected
hindgut diverticulum vascular element
detected detected
hindgut vascular element
detected detected
midgut vascular element
detected detected
left lung rudiment vascular element
detected detected
right lung rudiment vascular element
detected detected
tracheal diverticulum vascular element
detected detected
extraembryonic vascular system
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2683076
Entity Detected:Sgk1, serum/glucocorticoid regulated kinase 1 ( MGI:1340062)
Notes:The Sgk1 probe (s8609b60) used in this study by Sousa-Nunes et al., 2003 [PMID:14613977] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:either: C57BL/6 or (CBA/Ca x C57BL/10)F1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Sousa-Nunes R; Rana AA; Kettleborough R; Brickman JM; Clements M; Forrest A; Grimmond S; Avner P; Smith JC; Dunwoodie SL; Beddington RS, 2003 [PMID:14613977] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1101/gr.1362303] [ PMID:14613977] Sousa-Nunes R, Rana AA, Kettleborough R, Brickman JM, Clements M, Forrest A, Grimmond S, Avner P, Smith JC, Dunwoodie SL, Beddington RS 2003 Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection. Genome Res (13):2609-20
Links:MGI:2683408 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE