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EMAGE:4474

Unc5a unc-5 homolog A (C. elegans) ( MGI:894682)
TS19 (11.5 dpc)
in situ hybridisation

Data Images
EMAGE:4474
Figure 2A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(02)00248-4] Mech Dev 118:191-7, Engelkamp D, Cloning of three mouse Unc5 genes and their expression patterns at mid-gestation. Copyright 2002.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4474Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4474_wholemount_possible_3D_1.wlz
4474_wholemount_notDetected_3D_1.wlz
4474_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4474_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future spinal cord
detected detected
regionalExpression restricted ventrally.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Unc5a cloneA
Entity Detected:Unc5a, unc-5 homolog A (C. elegans) ( MGI:894682)
Sequence:sense strand is shown

>Unc5a cloneA
ACTGGAGCAAGGCATTGTGCTACCTTGTCGCCCCCCGGAAGGAATCCCCCCAGCTGAGGTGGAGTGGCTC
CGAAATGAGGACCTCGTGGACCCCTCCCTCGACCCCAATGTGTACATCACACGGGAGCACAGCCTAGTCG
TGCGGCAGGCCCGCCTGGCCGACACTGCCAACTACACCTGCGTGGCCAAGAACATCGTGGCCCGTCGCCG
AAGCGCCTCTGCGGCCGTCATTGTTTATGTGAACGGTGGGTGGTCGACGTGGACCGAGTGGTCCGTCTGC
AGTGCCAGCTGTGGGCGTGGCTGGCAGAAACGGAGCCGGAGCTGCACCAACCCGGCACCTCTCAACGGGG
GCGCCTTCTGTGAGGGGCAGAATGTCCAGAAAACAGCCTGCGCCACTCTGTGCCCAGTGGATGGGAGCTG
GAGCCCATGGAGTAAGTGGTCAGCCTGCGGGCTTGACTGCACCCACTGGCGGAGCCGGGAGTGCTCCGAC
CCAGCGCCCCGCAACGGAGGTGAGGAGTGCCGGGGTGCTGACCTGGACACCCGCAACTGTACCAGTGACC
TCTGCCTGCACACCTCTTCCGGCCCCGAGGACGTGGCTCTCTACATCGGCCTCGTCGCCGTGGCCGTGTG
CCTCATCTTGCTGCTGCTGGTCCTCGTCCTCATCTACTGCCGCAAGAAGGAAGGACTGGACTCAGACGTG
GCTGACTCATCCATCCTTACCTCAGGCTTCCAGCCTGTCAGCATCAAGCCCAGCAAAGCAGACAATCCCC
ATCTGCTCACCATCCAACCGGACCTCAGCACCACCACGACCACCTACCAGGGCAGCCTGTGTCCCCGGCA
GGATGGACCCAGCCCCAAGTTCCAGCTCTCTAATGGTCACCTGCTCAGCCCACTGGGCAGTGGCCGCCAT
ACGCTGCACCACAGCTCCCCCACCTCTGAGGCTGAGGACTTCGTCTCCCGCCTCTCCACCCAAAACTACT
TTCGTTCTCTGCCCCGCGGTACCAGCAACATGGCCTATGGGACCTTCAACTTCCTCGGGGGCCGGCTGAT
GATCCCTAACACAGGAATCAGCCTCCTCATACCCCCGGACGCCATCCCCCGAGGAAAGATCTACGAGATC
TACCTCACTCTGCACAAGCCAGAAGACGTGAGGTTGCCCCTAGCTGGCTGTCAGACCCTGCTGAGTCCTA
TCGTTAGCTGTGGGCCCCCAGGAGTCCTGCTCACCCGGCCAGTCATCCTTGCCATGGACCACTGCGGGGA
GCCCAGTCCCGACAGCTGGAGCCTGCGCCTCAAAAAGCAGTCCTGTGAGGGCAGCTGGGAGGACGTGCTG
CACCTTGGTGAGGAGTCGCCCTCTCATCTCTACTACTGCCAGCTGGAGGCCGGGGCCTGCTATGTCTTCA
CCGAGCAGCTAGGCCGCTTTGCCCTGGTGGGAGAGGCCCTCAGCGTGGCTGCCACCAAGCGCCTCAGGCT
CCTTCTGTTTGCCCCTGTGGCCTGTACGTCCCTCGAG
nt 714 - nt 2220 of AJ487852.1
Notes:The Unc5a (Unc5h1) probe used in this study by Engelkamp, 2002 [PMID:12351186] covered "bp 714-2220 of AJ487852 (excluding exon 6)". The pattern was verified by using at least one other non-overlapping RNA probe. Hybridisations with sense probes gave no signal.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:11.5 dpc
Theiler Stage:TS19
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Engelkamp D, 2002 [PMID:12351186] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(02)00248-4] [ PMID:12351186] Engelkamp D 2002 Cloning of three mouse Unc5 genes and their expression patterns at mid-gestation. Mech Dev (118):191-7
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE