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EMAGE:4477

Unc5d unc-5 homolog D (C. elegans) ( MGI:2389364)
TS19 (11.5 dpc)
in situ hybridisation

Data Images
EMAGE:4477
Figure 2D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(02)00248-4] Mech Dev 118:191-7, Engelkamp D, Cloning of three mouse Unc5 genes and their expression patterns at mid-gestation. Copyright 2002.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotation: Arrowhead points to expression.
Expression Pattern Description
Spatial Annotation:
EMAGE:4477Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4477_wholemount_possible_3D_1.wlz
4477_wholemount_notDetected_3D_1.wlz
4477_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4477_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
surface ectoderm
detected detected
regionalExpression is in a thin line on the body surface at the site of shoulder formation.
limb
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Unc5d cloneA
Entity Detected:Unc5d, unc-5 homolog D (C. elegans) ( MGI:2389364)
Sequence:sense strand is shown

>Unc5d cloneA
GAGCGGAGTACCATGGCAAGAATCACTCGGGGACTTTCCCCCATGGAAACAACCGCGGATTCAGTACAAT
ACATCCCAGAAACAAAACGCCGTACATCCAAAATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGACA
ACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAATGCCAAATACAGGGGTGAGTCTACTCATACCAC
ATGGTGCCATCCCAGAGGAGAATTCTTGGGAGATTTATATGTCAATCAACCAAGGTGAACCGAGCCTGCA
GTCAGATGGATCTGAGGTTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACAACT
CCCTTTGCGCTGACCATCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGAACATTCACCTGAAGAAGA
GGACCCAGCAGGGGAAGTGGGAGGAAGTGATGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCCTCTT
GGATCCCTTTGCCTGTCACGTGCTGCTTGATAGCTTTGGAACGTATGCCCTCACAGGAGAGCCAATCACA
GACTGTGCCGTAAAGCAGCTCAAGGTGGCTGTGTTTGGCTGCATGTCCTGTAACTCCTTGGATTACAACC
TGAGAGTTTACTGTGTGGACAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGACGAACGGCACCAAGG
CGGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATACATTCAGTCTCCAGGTCTCTGTC
CTTGACATCCCTCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATGCCAGGAAGTCCCCTTCTCCCGAG
TGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGCCTTCTCCCTGGAGCGCTACACGCCCACCACCACCCA
GCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATC
CTAGAGAGTGAACGAGAAACCATCACTTTCTTCGCACAAGAGGACAGTACCTTTCCTGCACAGACTGGCC
CAAAAGCCTTCAAAATTCCCTATTCCATCAGACAGAGGATCTGCGCCACGTTTGATACCCCAAATGCCAA
AGGCAAGGACTGGCAGATGTTAGCACAGAAGAACAGCATCAATAGGAATTTATCATATTTCGCTACCCAA
AGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGGAAGCTCGTCATCAGCAGGATGGGGACCTCGACTCGC
TCGCCTGTGCCCTTGAGGAGATTGGGAGGACACACACGAAACTATCCAACATCACAGAGCCACAGATTGA
TGATGCTGACTTCAACTACAGCAGGCAAAATGGACTCTAGTCTGTTTCTTCTCCGGAGGCA
nt 1801 - nt 3191 of AJ487854.1
Notes:The Unc5d (Unc5h4) probe used in this study by Engelkamp, 2002 [PMID:12351186] covered "bp 1801-3191 of AJ487854". The pattern was verified by using at least one other non-overlapping RNA probe. Hybridisations with sense probes gave no signal.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:11.5 dpc
Theiler Stage:TS19
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Engelkamp D, 2002 [PMID:12351186] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(02)00248-4] [ PMID:12351186] Engelkamp D 2002 Cloning of three mouse Unc5 genes and their expression patterns at mid-gestation. Mech Dev (118):191-7
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE